 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | M5M_04395 | 966119..968680 [-], 2562 | 410663445 | protein kinase | |
2 | M5M_04400 | 969062..970636 [+], 1575 | 410663446 | FHA domain-containing protein | Fha |
3 | M5M_04405 | 970710..971159 [+], 450 | 410663447 | hypothetical protein | TssJ |
4 | M5M_04410 | 971193..972527 [+], 1335 | 410663448 | hypothetical protein | TssK |
5 | M5M_04415 | 972531..973352 [+], 822 | 410663449 | hypothetical protein | TssL |
6 | M5M_04420 | 973379..976915 [+], 3537 | 410663450 | hypothetical protein | TssM |
7 | M5M_04425 | 976912..977574 [+], 663 | 410663451 | type VI secretion-associated protein, BMA_A0400 family | |
8 | M5M_04430 | 977800..979041 [+], 1242 | 410663452 | type VI secretion-associated protein, ImpA family | TssA |
9 | M5M_04435 | 979090..979608 [+], 519 | 410663453 | type VI secretion protein | TssB |
10 | M5M_04440 | 979611..981098 [+], 1488 | 410663454 | type VI secretion protein, EvpB/family | TssC |
11 | M5M_04445 | 981162..982673 [+], 1512 | 410663455 | type VI secretion protein, EvpB/family | TssC |
12 | M5M_04450 | 982675..983148 [+], 474 | 410663456 | hypothetical protein | TssE |
13 | M5M_04455 | 983145..984974 [+], 1830 | 410663457 | hypothetical protein | TssF |
14 | M5M_04460 | 984938..986080 [+], 1143 | 410663458 | hypothetical protein | TssG |
15 | M5M_04465 | 986090..988741 [+], 2652 | 410663459 | type VI secretion ATPase, ClpV1 family protein | TssH |
16 | M5M_04470 | 988827..989681 [-], 855 | 410663460 | Tfp pilus assembly protein, major pilin PilA | |
17 | M5M_04475 | 989726..990019 [-], 294 | 410663461 | hypothetical protein | PAAR |
18 | M5M_04480 | 990012..990584 [-], 573 | 410663462 | secreted protein | |
19 | M5M_04485 | 990635..992521 [-], 1887 | 410663463 | hypothetical protein | TssI |
20 | M5M_04490 | 992648..993136 [-], 489 | 410663464 | hemolysin-coregulated protein | TssD |
21 | M5M_04495 | 993501..996080 [-], 2580 | 410663465 | hypothetical protein | |
22 | M5M_04500 | 996112..996615 [-], 504 | 410663466 | CMP/dCMP deaminase zinc-binding protein | |
23 | M5M_04505 | 996605..997426 [-], 822 | 410663467 | Ribosomal RNA large subunit methyltransferase A (rRNA (guanine-N(1)-)-methyltransferase) (23S rRNA m1G745 methyltransferase) | |
24 | M5M_04510 | 997408..997653 [-], 246 | 410663468 | hypothetical protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein