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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | PputUW4_03068 (puuB3) | 3601411..3602706 [+], 1296 | 426409969 | gamma-glutamylputrescine oxidase | |
2 | PputUW4_03069 | 3602867..3603649 [-], 783 | 426409970 | DeoR family transcriptional regulator | |
3 | PputUW4_03070 | 3604075..3606258 [+], 2184 | 426409971 | ornithine decarboxylase | |
4 | PputUW4_03071 | 3606319..3607476 [-], 1158 | 426409972 | type VI secretion system OmpA/MotB domain-containing protein | TssA |
5 | PputUW4_03072 (tssE) | 3607502..3607942 [-], 441 | 426409973 | type VI secretion system lysozyme-like protein | TssE |
6 | PputUW4_03073 (tssJ) | 3607945..3608481 [-], 537 | 426409974 | type VI secretion lipoprotein | TssJ |
7 | PputUW4_03074 | 3608462..3609559 [-], 1098 | 426409975 | type VI secretion protein | TssG |
8 | PputUW4_03075 | 3609523..3611286 [-], 1764 | 426409976 | type VI secretion protein | TssF |
9 | PputUW4_03076 | 3611314..3612900 [-], 1587 | 426409977 | type VI secretion-associated protein | TssA |
10 | PputUW4_03077 (tssM) | 3612897..3616277 [-], 3381 | 426409978 | ImcF domain-containing protein | TssM |
11 | PputUW4_03078 | 3616287..3617513 [-], 1227 | 426409979 | hypothetical protein | |
12 | PputUW4_03079 | 3617517..3617774 [-], 258 | 426409980 | PAAR repeat-containing protein | PAAR |
13 | PputUW4_03080 | 3617808..3618386 [-], 579 | 426409981 | hypothetical protein | |
14 | PputUW4_03081 | 3618361..3619338 [-], 978 | 426409982 | hypothetical protein | |
15 | PputUW4_03082 | 3619418..3620056 [-], 639 | 426409983 | hypothetical protein | |
16 | PputUW4_03083 (vgrG1) | 3620053..3624066 [-], 4014 | 426409984 | ImpA family type VI secretion-associated protein | TssI |
17 | PputUW4_03084 (clpV) | 3624063..3626705 [-], 2643 | 426409985 | ClpV1 family type VI secretion ATPase | TssH |
18 | PputUW4_03085 (hcp) | 3626852..3627343 [-], 492 | 426409986 | type VI secretion system effector | TssD |
19 | PputUW4_03086 | 3627359..3629086 [-], 1728 | 426409987 | ompA/MotB domain-containing protein | TagL |
20 | PputUW4_03087 (tssL) | 3629097..3629780 [-], 684 | 426409988 | DotU family type IV/VI secretion system protein | TssL |
21 | PputUW4_03088 | 3629777..3631132 [-], 1356 | 426409989 | type VI secretion protein | TssK |
22 | PputUW4_03089 (tssC) | 3631174..3632712 [-], 1539 | 426409990 | EvpB family type VI secretion protein | TssC |
23 | PputUW4_03090 (tssB) | 3632746..3633249 [-], 504 | 426409991 | type VI secretion protein | TssB |
24 | PputUW4_03091 | 3633722..3634540 [-], 819 | 426409992 | hypothetical protein | |
25 | PputUW4_03092 | 3634599..3636320 [-], 1722 | 426409993 | SulP family sulfate transporter | |
26 | PputUW4_03093 | 3636637..3637089 [+], 453 | 426409994 | hypothetical protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein