 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | Sinac_2399 | 2957863..2959038 [+], 1176 | 430743276 | phosphohydrolase | |
2 | Sinac_2400 | 2959161..2959514 [-], 354 | 430743277 | hypothetical protein | |
3 | Sinac_2401 | 2959921..2961498 [-], 1578 | 430743278 | protein related to regulatory domain of methyltransferases | |
4 | Sinac_2402 | 2962010..2964067 [+], 2058 | 430743279 | Rhs element Vgr protein | TssI |
5 | Sinac_2403 | 2964211..2964882 [+], 672 | 430743280 | hypothetical protein | |
6 | Sinac_2404 | 2964887..2965177 [+], 291 | 430743281 | hypothetical protein | PAAR |
7 | Sinac_2405 | 2965255..2966586 [+], 1332 | 430743282 | hypothetical protein | |
8 | Sinac_2406 | 2966635..2967642 [-], 1008 | 430743283 | type VI secretion protein | TssG |
9 | Sinac_2407 | 2967812..2969638 [-], 1827 | 430743284 | type VI secretion protein | TssF |
10 | Sinac_2408 | 2969644..2970129 [-], 486 | 430743285 | type VI secretion system lysozyme-like protein | TssE |
11 | Sinac_2409 | 2970308..2970790 [-], 483 | 430743286 | hemolysin-coregulated protein | TssD |
12 | Sinac_2410 | 2970946..2972439 [-], 1494 | 430743287 | type VI secretion protein EvpB | TssC |
13 | Sinac_2411 | 2972441..2972965 [-], 525 | 430743288 | type VI secretion protein | TssB |
14 | Sinac_2412 | 2973186..2975075 [-], 1890 | 430743289 | type VI secretion-associated protein, ImpA family | TssA |
15 | Sinac_2413 | 2975078..2975938 [-], 861 | 430743290 | avirulence locus temperature-dependent protein secretion protein | TagJ |
16 | Sinac_2414 | 2976415..2977911 [+], 1497 | 430743291 | FHA domain-containing protein | Fha |
17 | Sinac_2415 | 2977926..2979344 [-], 1419 | 430743292 | hypothetical protein | TssM |
18 | Sinac_2416 | 2979371..2979997 [-], 627 | 430743293 | hypothetical protein | TssL |
19 | Sinac_2417 | 2980007..2981401 [-], 1395 | 430743294 | type VI secretion protein | TssK |
20 | Sinac_2418 | 2981828..2985772 [+], 3945 | 430743295 | hypothetical protein | |
21 | Sinac_2419 | 2985964..2987307 [+], 1344 | 430743296 | transposase family protein | |
22 | Sinac_2420 | 2987425..2990091 [-], 2667 | 430743297 | type VI secretion ATPase, ClpV1 family | TssH |
23 | Sinac_2421 | 2991024..2992028 [-], 1005 | 430743298 | dehydrogenase | |
24 | Sinac_2422 | 2992351..2993817 [-], 1467 | 430743299 | asparaginyl-tRNA synthetase | |
25 | Sinac_2423 | 2994153..2994557 [+], 405 | 430743300 | acetyltransferase | |
|
Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein