 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | Psest_0116 | 113461..114288 [+], 828 | 431925325 | hypothetical protein | |
2 | Psest_0117 | 114285..115076 [+], 792 | 431925326 | hypothetical protein | |
3 | Psest_0118 | 115073..115534 [+], 462 | 431925327 | hypothetical protein | |
4 | Psest_0119 | 115556..115762 [-], 207 | 431925328 | hypothetical protein | |
5 | Psest_0120 | 115976..116320 [-], 345 | 431925329 | hypothetical protein | |
6 | Psest_0121 | 116322..117569 [-], 1248 | 431925330 | LysM domain-containing protein | |
7 | Psest_0122 | 117575..118429 [-], 855 | 431925331 | hypothetical protein | |
8 | Psest_0123 | 118402..120501 [-], 2100 | 431925332 | Rhs element Vgr protein | TssI |
9 | Psest_0124 | 120517..122034 [-], 1518 | 431925333 | transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains | Sfa2 |
10 | Psest_0125 | 122036..124627 [-], 2592 | 431925334 | type VI secretion ATPase, ClpV1 family | TssH |
11 | Psest_0126 | 124639..125646 [-], 1008 | 431925335 | type VI secretion protein | TssG |
12 | Psest_0127 | 125610..127400 [-], 1791 | 431925336 | type VI secretion protein | TssF |
13 | Psest_0128 | 127453..127815 [-], 363 | 431925337 | hypothetical protein | |
14 | Psest_0129 | 127802..128437 [-], 636 | 431925338 | hypothetical protein | |
15 | Psest_0130 | 128434..130356 [-], 1923 | 431925339 | hypothetical protein | PAAR |
16 | Psest_0131 | 130368..130775 [-], 408 | 431925340 | type VI secretion system lysozyme-like protein | TssE |
17 | Psest_0132 | 130780..132258 [-], 1479 | 431925341 | type VI secretion protein EvpB | TssC |
18 | Psest_0133 | 132285..132791 [-], 507 | 431925342 | type VI secretion protein | TssB |
19 | Psest_0134 | 132808..134370 [-], 1563 | 431925343 | type VI secretion-associated protein | TssA |
20 | Psest_0135 | 134749..135651 [-], 903 | 431925344 | aldose 1-epimerase-like enzyme | |
21 | Psest_0136 | 135761..136450 [-], 690 | 431925345 | amino acid ABC transporter | |
22 | Psest_0137 | 136447..137142 [-], 696 | 431925346 | amino acid ABC transporter | |
23 | Psest_0138 | 137207..137962 [-], 756 | 431925347 | PAAT family amino acid ABC transporter substrate-binding protein | |
24 | Psest_0139 | 137978..138751 [-], 774 | 431925348 | amino acid ABC transporter ATP-binding protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein