14
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| III. genome coordinates of the T6SS gene cluster |
| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
| 1 | D781_1654 | 1745311..1745478 [+], 168 | 440230345 | ribosome modulation factor | |
| 2 | D781_1655 | 1745871..1746359 [+], 489 | 440230346 | hypothetical protein | |
| 3 | D781_1656 | 1746452..1746970 [-], 519 | 440230347 | beta-hydroxyacyl-(acyl carrier protein) dehydratase FabA | |
| 4 | D781_1657 | 1747039..1748808 [-], 1770 | 440230348 | putative ATP-dependent protease | |
| 5 | D781_1658 | 1748996..1749454 [+], 459 | 440230349 | hypothetical protein | |
6 | D781_1659 | 1749566..1750633 [-], 1068 | 440230350 | outer membrane protein/peptidoglycan-associated (lipo)protein | TagL |
| 7 | D781_1660 | 1750995..1751507 [-], 513 | 440230351 | SOS-response cell division inhibitor, blocks FtsZ ring formation | |
| 8 | D781_1661 | 1751738..1752343 [+], 606 | 440230352 | regulator of competence-specific genes | |
| 9 | D781_1662 | 1752388..1754523 [-], 2136 | 440230353 | putative membrane protein, TIGR01666 | |
| 10 | D781_1663 | 1754550..1755002 [-], 453 | 440230354 | hypothetical protein | |
| 11 | D781_1664 | 1755162..1757216 [+], 2055 | 440230355 | DNA/RNA helicase, superfamily I | |
| 12 | D781_1665 | 1757252..1757710 [-], 459 | 440230356 | methylglyoxal synthase | |
| 13 | D781_1666 | 1757839..1758393 [-], 555 | 440230357 | hypothetical protein | |
| 14 | D781_1667 | 1758446..1758538 [+], 93 | 440230358 | hypothetical protein | |
| 15 | D781_1668 | 1758686..1759099 [+], 414 | 440230359 | putative CoA-binding protein | |
| 16 | D781_1669 | 1759154..1759471 [-], 318 | 440230360 | hemimethylated DNA binding domain protein | |
| 17 | D781_1670 | 1759549..1760733 [-], 1185 | 440230361 | putative SAM-dependent methyltransferase | |
| 18 | D781_1671 | 1760978..1761256 [+], 279 | 440230362 | acylphosphatase | |
| 19 | D781_1672 | 1761268..1761597 [-], 330 | 440230363 | sulfur relay protein, TusE/DsrC/DsvC family | |
| 20 | D781_1673 | 1761773..1762858 [+], 1086 | 440230364 | theronine dehydrogenase-like Zn-dependent dehydrogenase | |
| 21 | D781_1674 | 1762929..1763585 [-], 657 | 440230365 | FtsH-interacting integral membrane protein | |
| 22 | D781_1676 | 1764726..1765223 [+], 498 | 440230366 | type VI secretion protein, VC_A0107 family | TssB |
| 23 | D781_1677 | 1765257..1766804 [+], 1548 | 440230367 | type VI secretion protein, EvpB/VC_A0108 family | TssC |
| 24 | D781_1678 | 1766817..1768157 [+], 1341 | 440230368 | type VI secretion protein, VC_A0114 family | TssK |
| 25 | D781_1679 | 1768154..1768828 [+], 675 | 440230369 | type IV / VI secretion system protein, DotU family | TssL |
26 | D781_1680 | 1768825..1770537 [+], 1713 | 440230370 | outer membrane protein/peptidoglycan-associated (lipo)protein | TagL |
| 27 | D781_1681 | 1770539..1771030 [+], 492 | 440230371 | type VI secretion system effector, Hcp1 family | TssD |
| 28 | D781_1682 | 1771304..1773943 [+], 2640 | 440230372 | type VI secretion ATPase, ClpV1 family | TssH |
| 29 | D781_1683 | 1773946..1776324 [+], 2379 | 440230373 | Rhs element Vgr protein | TssI |
| 30 | D781_1684 | 1776325..1777089 [+], 765 | 440230374 | hypothetical protein | |
| 31 | D781_1685 | 1777168..1777695 [+], 528 | 440230375 | Protein of unknown function (DUF3304) | |
| 32 | D781_1686 | 1777767..1778294 [+], 528 | 440230376 | Protein of unknown function (DUF3304) | |
| 33 | D781_1687 | 1778366..1778893 [+], 528 | 440230377 | Protein of unknown function (DUF3304) | |
| 34 | D781_1688 | 1778881..1781322 [+], 2442 | 440230378 | hypothetical protein | |
35 | D781_1689 | 1781336..1781593 [+], 258 | 440230379 | hypothetical protein | PAAR |
| 36 | D781_1690 | 1781623..1782729 [+], 1107 | 440230380 | hypothetical protein | |
| 37 | D781_1691 | 1782713..1786132 [+], 3420 | 440230381 | hypothetical protein | TssM |
| 38 | D781_1692 | 1787072..1788676 [+], 1605 | 440230382 | type VI secretion-associated protein, VC_A0119 family | TssA |
| 39 | D781_1693 | 1788720..1790474 [+], 1755 | 440230383 | type VI secretion protein, VC_A0110 family | TssF |
| 40 | D781_1694 | 1790438..1791523 [+], 1086 | 440230384 | type VI secretion protein, VC_A0111 family | TssG |
| 41 | D781_1695 | 1791501..1792043 [+], 543 | 440230385 | type VI secretion lipoprotein, VC_A0113 family | TssJ |
| 42 | D781_1696 | 1792113..1792799 [+], 687 | 440230386 | phosphatidylglycerophosphate synthase | |
| 43 | D781_1697 | 1792789..1793439 [+], 651 | 440230387 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | |
| 44 | D781_1698 | 1793436..1794371 [+], 936 | 440230388 | putative CDP-diglyceride synthetase/phosphatidate cytidylyltransferase | |
| 45 | D781_1699 | 1794395..1794841 [+], 447 | 440230389 | type VI secretion system lysozyme-related protein | TssE |
| 46 | D781_1701 | 1795383..1796753 [+], 1371 | 440230390 | hypothetical protein | TssA |
| 47 | D781_1702 | 1796732..1797886 [-], 1155 | 440230391 | 2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase | |
| 48 | D781_1703 | 1798234..1799616 [+], 1383 | 440230392 | xanthine permease | |
| 49 | D781_1704 | 1799594..1800094 [+], 501 | 440230393 | OHCU decarboxylase | |
| 50 | D781_1705 | 1800091..1800423 [+], 333 | 440230394 | hydroxyisourate hydrolase | |
| |
Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein
SecReT6 ID
Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein