I. Summary

SecReT6 ID	725
Strain	Myxococcus stipitatus DSM 14675
Replicon	chromosome [Browse all T6SS(s) in this replicon]
Accession	NC_020126
Location	6107913..6125605
Comment
Function	N/A
T6SS Type	Type i; subtype i1
Bioinformatics investigation has been performed on this T6SS.

II. T6SS components

Component	TssH	TssD	TssL	TssI	TssA	TssB	TssC	TssE	TssF
Number	1	1	1	0	1	1	1	1	1
Component	TssG	TssJ	TssK	TssM
Number	1	1	1	1

III. genome coordinates of the T6SS gene cluster
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Note
1	MYSTI_04762	6104270..6105181 [+], 912	442321715	alpha/beta fold family hydrolase
2	MYSTI_04763	6105233..6106198 [-], 966	442321716	lipoprotein
3	MYSTI_04764	6106204..6107805 [-], 1602	442321717	FHA domain-containing protein	Fha
4	MYSTI_04765	6107913..6110534 [-], 2622	442321718	ATP-dependent chaperone protein ClpB	TssH
5	MYSTI_04766	6110589..6111680 [-], 1092	442321719	hypothetical protein	TssG
6	MYSTI_04767	6111644..6113386 [-], 1743	442321720	hypothetical protein	TssF
7	MYSTI_04768	6113416..6113862 [-], 447	442321721	hypothetical protein	TssE
8	MYSTI_04769	6113879..6114370 [-], 492	442321722	hypothetical protein	TssD
9	MYSTI_04770	6114514..6115998 [-], 1485	442321723	hypothetical protein	TssC
10	MYSTI_04771	6116038..6116532 [-], 495	442321724	hypothetical protein	TssB
11	MYSTI_04772	6116559..6118211 [-], 1653	442321725	hypothetical protein	TssA
12	MYSTI_04773	6118246..6119184 [-], 939	442321726	hypothetical protein
13	MYSTI_04774	6119172..6122837 [-], 3666	442321727	hypothetical protein	TssM
14	MYSTI_04775	6122848..6123531 [-], 684	442321728	hypothetical protein	TssL
15	MYSTI_04776	6123624..6125039 [-], 1416	442321729	hypothetical protein	TssK
16	MYSTI_04777	6125036..6125605 [-], 570	442321730	hypothetical protein	TssJ
17	MYSTI_04778	6125800..6126765 [-], 966	442321731	malonyl CoA-acyl carrier protein transacylase
18	MYSTI_04779	6126799..6128391 [-], 1593	442321732	hypothetical protein

 Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein

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Proteins        Genes

V. Investigation of the genomic context of the T6SS gene cluster.

1. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the mobile genetic elements database, ACLAME.

Job_id: Replicon RefSeq: T6SS Region Start (bp): T6SS Region End (bp): Upstream Region (kb): Downstream Region (kb):

2. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the virulence factor database, VFDB.

Job_id: Replicon RefSeq: T6SS Region Start (bp): T6SS Region End (bp): Upstream Region (kb): Downstream Region (kb):

3. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against against the antibiotic resistance database, ARDB.

Job_id: Replicon RefSeq: T6SS Region Start (bp): T6SS Region End (bp): Upstream Region (kb): Downstream Region (kb):

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