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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | H045_06760 | 1467921..1468415 [-], 495 | 447916352 | hypothetical protein | |
2 | H045_06765 | 1468522..1469343 [+], 822 | 447916353 | putative aldo/keto reductase | |
3 | H045_06770 | 1469411..1469926 [-], 516 | 447916354 | hypothetical protein | TssD |
4 | H045_06775 | 1470483..1471952 [+], 1470 | 447916355 | hypothetical protein | TssA |
5 | H045_06780 | 1471988..1472485 [+], 498 | 447916356 | hypothetical protein | TssB |
6 | H045_06785 | 1472511..1473986 [+], 1476 | 447916357 | type VI secretion protein TssC2 | TssC |
7 | H045_06790 | 1474001..1474402 [+], 402 | 447916358 | GPW/gp25 family protein | TssE |
8 | H045_06795 | 1474392..1476179 [+], 1788 | 447916359 | type VI secretion protein TssF2 | TssF |
9 | H045_06800 | 1476143..1477150 [+], 1008 | 447916360 | type VI secretion protein TssG2 | TssG |
10 | H045_06805 | 1477163..1479601 [+], 2439 | 447916361 | ClpA/B-type protease | TssH |
11 | H045_06810 | 1479598..1481118 [+], 1521 | 447916362 | sigma-54 dependent transcriptional regulator, Fis family protein | Sfa2 |
12 | H045_06815 | 1481187..1481330 [+], 144 | 447916363 | type VI secretion-associated lipoprotein TagU | |
13 | H045_06820 | 1481333..1482505 [+], 1173 | 447916364 | type VI secretion protein Fha2 | Fha |
14 | H045_06825 | 1482535..1482996 [+], 462 | 447916365 | type VI secretion lipoprotein TssJ2 | TssJ |
15 | H045_06830 | 1482998..1484326 [+], 1329 | 447916366 | type VI secretion protein TssK2 | TssK |
16 | H045_06835 | 1484332..1485198 [+], 867 | 447916367 | putative outer membrane protein | TssL |
17 | H045_06840 | 1485243..1488575 [+], 3333 | 447916368 | type VI secretion protein IcmF | TssM |
18 | H045_06845 | 1488572..1489291 [+], 720 | 447916369 | serine/threonine phosphoprotein phosphatase Stp1 | Stp1 |
19 | H045_06850 | 1489288..1490124 [+], 837 | 447916370 | serine-threonine kinase Stk1 | Stk1 |
20 | H045_06855 | 1490132..1490461 [-], 330 | 447916371 | hypothetical protein | |
21 | H045_06860 | 1490484..1490738 [-], 255 | 447916372 | hypothetical protein | |
22 | H045_06865 | 1490892..1492502 [-], 1611 | 447916373 | ABC transporter ATP-binding protein | |
23 | H045_06870 | 1492504..1493523 [-], 1020 | 447916374 | putative oligopeptide ABC transporter membrane protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein