I. Summary
Component | TssH | TssD | TssL | TssI | TssA | TssB | TssC | TssE | TssF |
Number | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
Component | TssG | TssJ | TssK | TssM |
Number | 1 | 1 | 1 | 1 |
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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | BPSS0164 | 217017..217988 [+], 972 | 53721200 | quinone oxidoreductase | |
2 | BPSS0165 | 218043..218969 [+], 927 | 53721201 | dioxygenase | |
3 | BPSS0166 | 219213..220175 [-], 963 | 53721202 | LysR family transcriptional regulator | |
4 | BPSS0167 | 221397..225473 [-], 4077 | 53721203 | hypothetical protein | TssM |
5 | BPSS0168 | 225502..226767 [-], 1266 | 53721204 | hypothetical protein | TssL |
6 | BPSS0169 | 226856..228202 [-], 1347 | 53721205 | hypothetical protein | TssK |
7 | BPSS0170 | 228224..228736 [-], 513 | 53721206 | lipoprotein | TssJ |
8 | BPSS0171 | 228834..229319 [-], 486 | 53721207 | hypothetical protein | TssD |
9 | BPSS0172 | 229436..230935 [-], 1500 | 53721208 | hypothetical protein | TssC |
10 | BPSS0173 | 230970..231551 [-], 582 | 53721209 | hypothetical protein | TssB |
11 | BPSS0174 | 231587..234526 [-], 2940 | 53721210 | chaperone | TssH |
12 | BPSS0175 | 235059..235778 [+], 720 | 53721211 | hypothetical protein | |
13 | BPSS0176 | 235775..236740 [+], 966 | 53721212 | hypothetical protein | TagJ |
14 | BPSS0177 | 236781..237308 [+], 528 | 53721213 | hypothetical protein | TssE |
15 | BPSS0178 | 237339..239228 [+], 1890 | 53721214 | hypothetical protein | TssF |
16 | BPSS0179 | 239240..240313 [+], 1074 | 53721215 | hypothetical protein | TssG |
17 | BPSS0180 | 240310..241455 [+], 1146 | 53721216 | hypothetical protein | TssA |
18 | BPSS0181 | 241527..243854 [+], 2328 | 53721217 | hypothetical protein | TssI |
19 | BPSS0182 | 243886..246363 [+], 2478 | 53721218 | hypothetical protein | |
20 | BPSS0183 | 246360..247442 [+], 1083 | 53721219 | hypothetical protein | |
21 | BPSS0184 | 247624..248283 [+], 660 | 53721220 | hypothetical protein | |
22 | BPSS0185 | 248330..248704 [+], 375 | 53721221 | hypothetical protein | |
23 | BPSS0186 | 249406..251322 [-], 1917 | 53721222 | hypothetical protein | |
24 | BPSS0187 | 251662..252555 [-], 894 | 53721223 | LysR family transcriptional regulator | |
25 | BPSS0188 | 252651..253427 [+], 777 | 53721224 | dehydrogenase | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein
V. Investigation of the genomic context of the T6SS gene cluster.