 |
| III. genome coordinates of the T6SS gene cluster |
| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
| 1 | XCAW_00149 (wbbJ) | 188717..189295 [+], 579 | 471265709 | Acetyltransferase (the isoleucine patch superfamily) | |
| 2 | XCAW_00150 (uspA) | 189553..189999 [+], 447 | 471265710 | Universal stress protein UspA and related nucleotide-binding protein | |
| 3 | XCAW_00151 (araC) | 190096..190767 [-], 672 | 471265711 | AraC-type DNA-binding domain-containing protein | |
| 4 | XCAW_00152 | 191081..191590 [+], 510 | 471265712 | Hypothetical Protein | TssB |
| 5 | XCAW_00153 | 191594..193087 [+], 1494 | 471265713 | Type VI secretion protein, EvpB/VC_A0108 family | TssC |
| 6 | XCAW_00154 (hcp) | 193168..193671 [+], 504 | 471265714 | Hemolysin-coregulated protein (uncharacterized) | TssD |
7 | XCAW_00155 | 193870..194664 [+], 795 | 471265715 | Type VI secretion protein, ImpE/SciE family | TagJ |
| 8 | XCAW_00156 | 194670..195173 [+], 504 | 471265716 | Hypothetical Protein | TssE |
| 9 | XCAW_00157 | 195178..197061 [+], 1884 | 471265717 | Type VI secretion protein, VC_A0110 family | TssF |
| 10 | XCAW_00158 | 197058..198065 [+], 1008 | 471265718 | Type VI secretion protein, VC_A0111 family | TssG |
| 11 | XCAW_00159 (clpA) | 198121..200901 [+], 2781 | 471265719 | ATPases with chaperone activity, ATP-binding subunit | TssH |
| 12 | XCAW_00160 | 201560..201904 [+], 345 | 471265720 | Hypothetical Protein | |
| 13 | XCAW_00161 | 201965..202318 [-], 354 | 471265721 | Transposase | |
| 14 | XCAW_00162 | 202683..202991 [+], 309 | 471265722 | Hypothetical Protein | |
| 15 | XCAW_00164 | 202992..203396 [-], 405 | 471265724 | Hypothetical Protein | |
| 16 | XCAW_00163 | 203269..205296 [+], 2028 | 471265723 | Hypothetical Protein | |
| 17 | XCAW_00165 | 205704..206438 [+], 735 | 471265725 | secreted protein | |
| 18 | XCAW_00166 | 207087..208454 [-], 1368 | 471265726 | Hypothetical Protein | |
| 19 | XCAW_00167 (appA) | 208462..209769 [-], 1308 | 471265727 | acid phosphatase | |
| 20 | XCAW_00168 | 209851..212736 [-], 2886 | 471265728 | Hypothetical Protein | |
| 21 | XCAW_00169 | 213201..214274 [-], 1074 | 471265729 | Transmembrane sensor | |
| 22 | XCAW_00170 (rpoE) | 214268..214741 [-], 474 | 471265730 | RNA polymerase sigma-E factor | |
| 23 | XCAW_00171 | 215144..215683 [+], 540 | 471265731 | Extracytoplasmic sigma factor | |
| 24 | XCAW_00172 (pknB) | 215662..218181 [+], 2520 | 471265732 | Serine/threonine kinase | |
25 | XCAW_00173 | 218294..218539 [+], 246 | 471265733 | hypothetical protein | PAAR |
| 26 | XCAW_00174 | 218775..220106 [+], 1332 | 471265734 | methyltransferase (contains TPR repeat) | |
| 27 | XCAW_00175 (vgrG) | 220257..222224 [+], 1968 | 471265735 | Hypothetical Protein | TssI |
| 28 | XCAW_00176 | 222263..222769 [+], 507 | 471265736 | Hypothetical Protein | |
29 | XCAW_00177 | 223056..224372 [+], 1317 | 471265737 | FHA-domain-containing protein | Fha |
| 30 | XCAW_00178 | 224952..226286 [+], 1335 | 471265738 | Type VI secretion protein, VC_A0114 family | TssK |
| 31 | XCAW_00179 | 226289..227548 [+], 1260 | 471265739 | Type VI secretion system OmpA/MotB family protein | TssL |
| 32 | XCAW_00180 | 227551..231075 [+], 3525 | 471265740 | Hypothetical Protein | TssM |
| 33 | XCAW_00181 | 231072..231608 [+], 537 | 471265741 | Hypothetical Protein | |
| 34 | XCAW_00182 (ptc1) | 231644..232360 [+], 717 | 471265742 | Phosphoprotein phosphatase | |
| 35 | XCAW_00183 | 232365..236072 [+], 3708 | 471265743 | Serine/threonine kinase | |
| 36 | XCAW_00184 | 236069..236530 [+], 462 | 471265744 | Hypothetical Protein | |
| 37 | XCAW_00185 (fhaC) | 236521..238203 [+], 1683 | 471265745 | Hemolysin activation | |
| 38 | XCAW_00186 (fhaB) | 238215..245342 [+], 7128 | 471265746 | hemagglutinin | |
| 39 | XCAW_00187 | 245392..246435 [+], 1044 | 471265747 | Type VI secretion-associated protein, ImpA family | TssA |
| 40 | XCAW_00188 | 246758..247048 [-], 291 | 471265748 | Hypothetical Protein | |
| 41 | XCAW_00189 (polA) | 247125..249929 [+], 2805 | 471265749 | DNA polymerase I - 3'-5' exonuclease | |
| 42 | XCAW_00190 | 250553..250756 [+], 204 | 471265750 | Hypothetical Protein | |
| |
Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein
SecReT6 ID
Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein