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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | H681_14830 | 3346033..3347355 [-], 1323 | 472326130 | CzcB family heavy metal RND efflux membrane fusion protein | |
2 | H681_14835 | 3347505..3348485 [-], 981 | 472326131 | CzcC family heavy metal RND efflux outer membrane protein | |
3 | H681_14850 | 3350049..3350555 [-], 507 | 472326132 | N-acetyltransferase GCN5 | |
4 | H681_14855 | 3350777..3351835 [-], 1059 | 472326133 | hypothetical protein | TssA |
5 | H681_14860 | 3351832..3355656 [-], 3825 | 472326134 | type VI secretion protein IcmF | TssM |
6 | H681_14865 | 3355653..3356423 [-], 771 | 472326135 | type VI secretion protein DotU | TssL |
7 | H681_14870 | 3356436..3357725 [-], 1290 | 472326136 | hypothetical protein | TssK |
8 | H681_14875 | 3357821..3358246 [-], 426 | 472326137 | hypothetical protein | |
9 | H681_14880 | 3358504..3359076 [+], 573 | 472326138 | hypothetical protein | TssB |
10 | H681_14885 | 3359101..3360588 [+], 1488 | 472326139 | hypothetical protein | TssC |
11 | H681_14890 | 3360662..3361159 [+], 498 | 472326140 | hypothetical protein | TssD |
12 | H681_14895 | 3361172..3361600 [+], 429 | 472326141 | hypothetical protein | TssE |
13 | H681_14900 | 3361584..3363410 [+], 1827 | 472326142 | type VI secretion protein VasA | TssF |
14 | H681_14905 | 3363374..3364387 [+], 1014 | 472326143 | hypothetical protein | TssG |
15 | H681_14910 | 3364387..3366936 [+], 2550 | 472326144 | type VI secretion ATPase | TssH |
16 | H681_14915 | 3367683..3369689 [+], 2007 | 472326145 | hypothetical protein | TssI |
17 | H681_14920 | 3369700..3370239 [+], 540 | 472326146 | hypothetical protein | |
18 | H681_14925 | 3370303..3371205 [+], 903 | 472326147 | hypothetical protein | |
19 | H681_14930 | 3371242..3371637 [-], 396 | 472326148 | hypothetical protein | |
20 | H681_14935 | 3372019..3372714 [-], 696 | 472326149 | hypothetical protein | |
21 | H681_14940 | 3373084..3374631 [+], 1548 | 472326150 | diguanylate cyclase | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein