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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | G655_13160 | 2889247..2890452 [-], 1206 | 478478824 | hypothetical protein | |
2 | G655_13165 | 2890653..2891294 [-], 642 | 478478825 | putative transcriptional regulator | |
3 | G655_13170 | 2891571..2891966 [+], 396 | 478478826 | hypothetical protein | |
4 | G655_13175 | 2891989..2892525 [-], 537 | 478478827 | hypothetical protein | |
5 | G655_13180 | 2892536..2894542 [-], 2007 | 478478828 | hypothetical protein | TssI |
6 | G655_13185 | 2894579..2895646 [-], 1068 | 478478829 | hypothetical protein | |
7 | G655_13190 | 2895685..2896110 [-], 426 | 478478830 | hypothetical protein | |
8 | G655_13195 | 2896292..2898841 [-], 2550 | 478478831 | putative ClpA/B-type protease | TssH |
9 | G655_13200 | 2898843..2899859 [-], 1017 | 478478832 | hypothetical protein | TssG |
10 | G655_13205 | 2899823..2901616 [-], 1794 | 478478833 | type VI secretion protein VasA | TssF |
11 | G655_13210 | 2901600..2902025 [-], 426 | 478478834 | hypothetical protein | TssE |
12 | G655_13215 | 2902038..2902535 [-], 498 | 478478835 | hypothetical protein | TssD |
13 | G655_13220 | 2902609..2904093 [-], 1485 | 478478836 | hypothetical protein | TssC |
14 | G655_13225 | 2904116..2904661 [-], 546 | 478478837 | hypothetical protein | TssB |
15 | G655_13230 | 2904869..2905345 [+], 477 | 478478838 | hypothetical protein | |
16 | G655_13235 | 2905444..2906736 [+], 1293 | 478478839 | hypothetical protein | TssK |
17 | G655_13240 | 2906754..2907512 [+], 759 | 478478840 | type VI secretion protein DotU | TssL |
18 | G655_13245 | 2907509..2911324 [+], 3816 | 478478841 | type VI secretion protein IcmF | TssM |
19 | G655_13250 | 2911321..2912421 [+], 1101 | 478478842 | hypothetical protein | TssA |
20 | G655_13255 | 2912531..2913616 [+], 1086 | 478478843 | putative transcriptional regulator | Sfa3 |
21 | G655_13260 | 2913852..2914118 [+], 267 | 478478844 | hypothetical protein | |
22 | G655_13265 | 2914278..2914838 [+], 561 | 478478845 | NADH-dependent FMN reductase MsuE | |
23 | G655_13270 | 2914848..2915993 [+], 1146 | 478478846 | methanesulfonate sulfonatase MsuD | |
24 | G655_13275 | 2916023..2917207 [+], 1185 | 478478847 | putative FMNH2-dependent monooxygenase | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein