 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | KUK_1087 (trkA) | 1172521..1173897 [+], 1377 | 479197076 | Trk system potassium uptake protein | |
2 | KUK_1088 (trkH) | 1173906..1175378 [+], 1473 | 479197077 | Trk system potassium uptake protein | |
3 | KUK_1089 | 1175385..1175855 [-], 471 | 479197078 | rRNA methylase | |
4 | KUK_1090 | 1175858..1176559 [-], 702 | 479197079 | putative phophoribosyltransferase protein | |
5 | KUK_1091 | 1176601..1177530 [+], 930 | 479197080 | putative SAM-dependent methyltransferase | |
6 | KUK_1092 | 1177478..1178581 [-], 1104 | 479197081 | hypothetical protein | TssG |
7 | KUK_1093 | 1178725..1181550 [+], 2826 | 479197082 | Type VI secretion ClpV1 ATPase | TssH |
8 | KUK_1094 | 1181700..1184351 [-], 2652 | 479197083 | FHA domain protein | |
9 | KUK_1095 | 1184466..1184942 [-], 477 | 479197084 | putative lipoprotein | |
10 | KUK_1096 | 1185172..1185681 [+], 510 | 479197085 | putative lipoprotein | TssJ |
11 | KUK_1097 | 1185694..1187046 [+], 1353 | 479197086 | hypothetical protein | TssK |
12 | KUK_1098 | 1187054..1188391 [+], 1338 | 479197087 | OmpA-family protein | TssL |
13 | KUK_1099 | 1188403..1192029 [+], 3627 | 479197088 | hypothetical protein | TssM |
14 | KUK_1100 | 1192031..1192753 [+], 723 | 479197089 | hypothetical protein | |
15 | KUK_1101 | 1192759..1193658 [+], 900 | 479197090 | hypothetical protein | |
16 | KUK_1102 | 1193661..1194212 [+], 552 | 479197091 | RHS domain family protein | |
17 | KUK_1103 | 1194231..1194623 [+], 393 | 479197092 | hypothetical protein | |
18 | KUK_1104 | 1195254..1197137 [+], 1884 | 479197093 | hypothetical protein | |
19 | KUK_1105 | 1197226..1198287 [+], 1062 | 479197094 | hypothetical protein | TssA |
20 | KUK_1106 | 1198325..1198858 [+], 534 | 479197095 | hypothetical protein | TssB |
21 | KUK_1107 | 1198867..1200360 [+], 1494 | 479197096 | hypothetical protein | TssC |
22 | KUK_1108 | 1200428..1200913 [+], 486 | 479197097 | hypothetical protein | TssD |
23 | KUK_1109 | 1201001..1201834 [+], 834 | 479197098 | ImpE-like protein | TagJ |
24 | KUK_1110 | 1201845..1202408 [+], 564 | 479197099 | lysozyme-like protein | TssE |
25 | KUK_1111 | 1202408..1204303 [+], 1896 | 479197100 | hypothetical protein | TssF |
26 | KUK_1112 | 1204383..1205087 [+], 705 | 479197101 | hypothetical protein | |
27 | KUK_1113 | 1205165..1207648 [-], 2484 | 479197102 | TonB-dependent receptor | |
28 | KUK_1114 | 1207913..1208533 [+], 621 | 479197103 | hypothetical protein | |
29 | KUK_1115 | 1208928..1210472 [+], 1545 | 479197104 | Rhs family protein | TssI |
30 | KUK_1116 | 1210498..1211364 [+], 867 | 479197105 | hypothetical protein | |
31 | KUK_1117 | 1211377..1214043 [+], 2667 | 479197106 | hypothetical protein | |
32 | KUK_1118 | 1214046..1215122 [+], 1077 | 479197107 | hypothetical protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein