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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | ENC_08860 | 930787..931752 [+], 966 | 479271620 | L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily | |
2 | ENC_08870 | 931743..932456 [-], 714 | 479271621 | Predicted carboxypeptidase | |
3 | ENC_08900 | 935277..935768 [+], 492 | 479271622 | type VI secretion protein, VC_A0107 family | TssB |
4 | ENC_08910 | 935803..937344 [+], 1542 | 479271623 | type VI secretion protein, EvpB/VC_A0108 family | TssC |
5 | ENC_08920 | 937360..938700 [+], 1341 | 479271624 | type VI secretion protein, VC_A0114 family | TssK |
6 | ENC_08930 | 938697..939386 [+], 690 | 479271625 | type IV / VI secretion system protein, DotU family | TssL |
7 | ENC_08940 | 939383..941089 [+], 1707 | 479271626 | Outer membrane protein and related peptidoglycan-associated (lipo)proteins | TagL |
8 | ENC_08950 | 941095..941586 [+], 492 | 479271627 | type VI secretion system effector, Hcp1 family | TssD |
9 | ENC_08960 | 941760..944405 [+], 2646 | 479271628 | type VI secretion ATPase, ClpV1 family | TssH |
10 | ENC_08970 | 944402..946894 [+], 2493 | 479271629 | type VI secretion system Vgr family protein | TssI |
11 | ENC_08980 | 947632..947796 [+], 165 | 479271630 | hypothetical protein | |
12 | ENC_09000 | 950888..951283 [+], 396 | 479271631 | hypothetical protein | |
13 | ENC_09010 | 951313..952044 [+], 732 | 479271632 | Protein of unknown function (DUF3274). | |
14 | ENC_09020 | 952396..953826 [+], 1431 | 479271633 | hypothetical protein | |
15 | ENC_09050 | 957564..959165 [+], 1602 | 479271634 | type VI secretion-associated protein, VC_A0119 family | TssA |
16 | ENC_09060 | 959207..960961 [+], 1755 | 479271635 | type VI secretion protein, VC_A0110 family | TssF |
17 | ENC_09070 | 960925..962010 [+], 1086 | 479271636 | type VI secretion protein, VC_A0111 family | TssG |
18 | ENC_09090 | 962533..962988 [+], 456 | 479271637 | type VI secretion system lysozyme-related protein | TssE |
19 | ENC_09120 | 964705..965193 [+], 489 | 479271638 | hypothetical protein | |
20 | ENC_09130 | 965491..965706 [+], 216 | 479271639 | hypothetical protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein