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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | BTI_4615 | 1281918..1282298 [-], 381 | 488606779 | hypothetical protein | |
2 | BTI_4616 | 1282312..1282971 [-], 660 | 488605865 | hypothetical protein | |
3 | BTI_4617 | 1283043..1284125 [-], 1083 | 488606730 | pentapeptide repeats family protein | |
4 | BTI_4618 | 1284122..1286599 [-], 2478 | 488606682 | pentapeptide repeats family protein | |
5 | BTI_4619 | 1286631..1288919 [-], 2289 | 488606945 | Rhs element Vgr family protein | TssI |
6 | BTI_4620 | 1288990..1290090 [-], 1101 | 488606832 | impA-related N-terminal family protein | TssA |
7 | BTI_4621 | 1290087..1291178 [-], 1092 | 488607122 | hypothetical protein | TssG |
8 | BTI_4622 | 1291178..1293067 [-], 1890 | 488606465 | hypothetical protein | TssF |
9 | BTI_4623 | 1293096..1293677 [-], 582 | 488606292 | lysozyme family protein | TssE |
10 | BTI_4624 | 1293664..1294014 [-], 351 | 488606370 | impE family protein | TagJ |
11 | BTI_4625 | 1294011..1294733 [-], 723 | 488605610 | hypothetical protein | |
12 | BTI_4626 (clpV) | 1295264..1297975 [+], 2712 | 488606906 | type VI secretion ATPase, ClpV1 family | TssH |
13 | BTI_4627 | 1298009..1298590 [+], 582 | 488607433 | hypothetical protein | TssB |
14 | BTI_4628 | 1298624..1300123 [+], 1500 | 488606934 | hypothetical protein | TssC |
15 | BTI_4629 (hcp1) | 1300240..1300725 [+], 486 | 488607525 | protein hcp1 | TssD |
16 | BTI_4630 | 1300821..1301324 [+], 504 | 488605432 | type VI secretion lipofamily protein | TssJ |
17 | BTI_4631 | 1301346..1302692 [+], 1347 | 488606499 | hypothetical protein | TssK |
18 | BTI_4632 | 1302781..1304055 [+], 1275 | 488607242 | type VI secretion system OmpA/MotB family protein | TssL |
19 | BTI_4633 | 1304085..1308146 [+], 4062 | 488605363 | intracellular multiplication and macrophage-killing family protein | TssM |
20 | BTI_4634 | 1308257..1308553 [-], 297 | 488605587 | hypothetical protein | |
21 | BTI_4635 | 1308927..1310843 [-], 1917 | 488606626 | SMP-30/Gluconolaconase/LRE-like region family protein | |
22 | BTI_4636 | 1311460..1312221 [+], 762 | 488607024 | short chain dehydrogenase family protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein