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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | BRPE64_ACDS03290 (rplM) | 332662..333090 [+], 429 | 507514862 | 50S ribosomal protein L13 | |
2 | BRPE64_ACDS03300 (rpsI) | 333102..333494 [+], 393 | 507514863 | 30S ribosomal protein S9 | |
3 | BRPE64_ACDS03310 | 333737..334069 [+], 333 | 507514864 | putative iron-sulfur cluster insertion protein ErpA 1 | |
4 | BRPE64_ACDS03320 | 334158..335327 [-], 1170 | 507514865 | anhydro-N-acetylmuramic acid kinase | |
5 | BRPE64_ACDS03330 (tyrS) | 335648..336904 [+], 1257 | 507514866 | tyrosine--tRNA ligase | |
6 | BRPE64_ACDS03340 (dtd) | 336909..337367 [+], 459 | 507514867 | D-tyrosyl-tRNA(Tyr) deacylase | |
7 | BRPE64_ACDS03350 | 337535..339031 [+], 1497 | 507514868 | hypothetical protein | TssC |
8 | BRPE64_ACDS03360 | 339157..339642 [+], 486 | 507514869 | type VI secretion system effector Hcp1 family | TssD |
9 | BRPE64_ACDS03370 | 339754..340269 [+], 516 | 507514870 | hypothetical protein | TssJ |
10 | BRPE64_ACDS03380 | 340640..341119 [+], 480 | 507514871 | hypothetical protein | TssE |
11 | BRPE64_ACDS03390 | 342635..344527 [+], 1893 | 507514872 | hypothetical protein | TssF |
12 | BRPE64_ACDS03400 | 344530..345588 [+], 1059 | 507514873 | type VI secretion protein VC_A0111 family | TssG |
13 | BRPE64_ACDS03410 | 345677..346771 [+], 1095 | 507514874 | ImpA domain protein | TssA |
14 | BRPE64_ACDS03420 (ruvB) | 346795..347853 [-], 1059 | 507514875 | Holliday junction ATP-dependent DNA helicase RuvB | |
15 | BRPE64_ACDS03430 (ruvA) | 347911..348492 [-], 582 | 507514876 | Holliday junction ATP-dependent DNA helicase RuvA | |
16 | BRPE64_ACDS03440 (ruvC) | 348517..349059 [-], 543 | 507514877 | crossover junction endodeoxyribonuclease RuvC | |
17 | BRPE64_ACDS03450 (purH) | 349176..350750 [-], 1575 | 507514878 | bifunctional purine biosynthesis protein PurH | |
18 | BRPE64_ACDS03460 (fis) | 350806..351039 [-], 234 | 507514879 | DNA-binding protein Fis | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein