SecReT6 ID | 791  |
Strain | Edwardsiella tarda PPD130/91 |
Replicon | chromosome [Browse all T6SS(s) in this replicon] |
Accession | AY424360 |
Location | 3625..24399 |
Comment | Virulence in blue gourami fish; virulence in several other fish models; invasion of cultured carp epithelial cells |
Function | anti-eukaryotic; effector translocation;virulence |
T6SS Type | Type i; subtype i4b |
Experimental investigation has been performed on this T6SS. |
Component | TssH | TssD | TssL | TssI | TssA | TssB | TssC | TssE | TssF |
Number | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
Component | TssG | TssJ | TssK | TssM |
Number | 1 | 1 | 1 | 1 |
 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | - | 90..788 [-], 699 | 158512111 | putative transporting ATPase | |
2 | - | 739..1581 [-], 843 | 158512112 | hypothetical protein | |
3 | - | 1654..1821 [-], 168 | 158512113 | hypothetical protein | |
4 | - | 1843..3297 [-], 1455 | 158512114 | hypothetical protein | |
5 | - (evpP) | 3625..4182 [+], 558 | 158512115 | EvpP | EvpP (e) |
6 | - (evpA) | 4431..4946 [+], 516 | 40287636 | EvpA | TssB |
7 | - (evpB) | 4943..6430 [+], 1488 | 40287637 | EvpB | TssC |
8 | - (evpC) | 6500..6991 [+], 492 | 40287638 | EvpC | TssD |
9 | - (evpD) | 7088..8311 [+], 1224 | 40287639 | EvpD | |
10 | - (evpE) | 8320..8796 [+], 477 | 45332447 | EvpE | TssE |
11 | - (evpF) | 8800..10641 [+], 1842 | 158512125 | EvpF | TssF |
12 | - (evpG) | 10638..11663 [+], 1026 | 158512126 | EvpG | TssG |
13 | - (evpH) | 11782..14394 [+], 2613 | 158512127 | EvpH | TssH |
14 | - (evpI) | 14394..16379 [+], 1986 | 158512116 | EvpI | TssI |
15 | - (evpJ) | 16475..16777 [+], 303 | 158512117 | EvpJ | PAAR |
16 | - (evpK) | 16791..17858 [+], 1068 | 158512118 | EvpK | TssA |
17 | - (evpL) | 17779..18486 [+], 708 | 158512119 | EvpL | TssJ |
18 | - (evpM) | 18585..19973 [+], 1389 | 158512120 | EvpM | TssK |
19 | - (evpN) | 19970..20620 [+], 651 | 158512121 | EvpN | TssL |
20 | - (evpO) | 20608..24399 [+], 3792 | 158512122 | EvpO | TssM |
21 | - | 24531..25418 [-], 888 | 158512123 | hypothetical protein | |
22 | - | 25375..26460 [-], 1086 | 158512124 | hypothetical protein | |
|

Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein
V. Investigation of the genomic context of the T6SS gene cluster.