 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | VEPGS_0001 | 75..1178 [-], 1104 | 225382144 | hypothetical protein | |
2 | VEPGS_0002 | 1679..2470 [-], 792 | 225382145 | Dotu family type VI secretion protein | TssL |
3 | VEPGS_0003 | 2467..3792 [-], 1326 | 225382146 | type VI secretion protein | TssK |
4 | VEPGS_0004 | 4297..5571 [-], 1275 | 225382147 | type VI secretion system FHA-containing domain protein | Fha |
5 | VEPGS_0005 | 5800..6447 [-], 648 | 225382148 | hypothetical protein | |
6 | VEPGS_0006 | 6951..8264 [+], 1314 | 225382149 | hypothetical protein | TssA |
7 | VEPGS_0007 | 8292..11681 [+], 3390 | 225382150 | type VI secretion system IcmF | TssM |
8 | VEPGS_0008 | 11713..12165 [+], 453 | 225382151 | transcriptional regulator | |
9 | VEPGS_0009 | 12220..12741 [-], 522 | 225382152 | hypothetical protein | TssG |
10 | VEPGS_0010 | 13544..15079 [-], 1536 | 225382153 | hypothetical protein | TssF |
11 | VEPGS_0011 | 15090..15500 [-], 411 | 225382154 | type VI secretion system lysozyme-related protein | TssE |
12 | VEPGS_0012 | 15562..17037 [-], 1476 | 225382155 | hypothetical protein | TssC |
13 | VEPGS_0013 | 17046..17552 [-], 507 | 225382156 | hypothetical protein | TssB |
14 | VEPGS_0014 | 17579..19243 [-], 1665 | 225382157 | type VI secretion system-associated VCA0119 | TssA |
15 | VEPGS_0015 | 19230..21230 [-], 2001 | 225382158 | serine/threonine protein kinase | |
16 | VEPGS_0016 | 21468..22412 [-], 945 | 225382159 | hypothetical protein | |
17 | VEPGS_0017 | 22405..22650 [-], 246 | 225382160 | hypothetical protein | |
18 | VEPGS_0018 | 23377..24696 [-], 1320 | 225382161 | hypothetical protein | |
19 | VEPGS_0019 | 24791..25189 [-], 399 | 225382162 | hypothetical protein | |
20 | VEPGS_0020 | 25276..27354 [-], 2079 | 225382163 | putative VgrG protein | TssI |
21 | VEPGS_0021 | 27427..27945 [-], 519 | 225382164 | uncharacterized hemolysin-coregulated protein | TssD |
22 | VEPGS_0022 | 28396..31080 [+], 2685 | 225382165 | ATPases with chaperone activity ATP-binding subunit | TssH |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein