 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | LF82_0358 (csdA) | 2921592..2922797 [+], 1206 | 222157496 | Cysteine sulfinate desulfinase | |
2 | LF82_0359 (csdE) | 2922797..2923240 [+], 444 | 222157497 | sufE-like protein ygdK | |
3 | LF82_3159 (ygdL) | 2923291..2924097 [-], 807 | 222157498 | hypothetical protein | |
4 | LF82_1355 (mltA) | 2924174..2925271 [-], 1098 | 222157499 | Membrane-bound lytic murein transglycosylase A | |
5 | LF82_426 | 2926406..2926906 [+], 501 | 222157500 | hypothetical protein | TssB |
6 | LF82_427 | 2926965..2928503 [+], 1539 | 222157501 | hypothetical protein | TssC |
7 | LF82_428 | 2928523..2929860 [+], 1338 | 222157502 | hypothetical protein | TssK |
8 | LF82_429 | 2929857..2930522 [+], 666 | 222157503 | hypothetical protein | TssL |
9 | LF82_430 | 2930535..2932187 [+], 1653 | 222157504 | hypothetical protein | TagL |
10 | LF82_431 | 2932245..2932736 [+], 492 | 222157505 | Secreted protein Hcp | TssD |
11 | LF82_432 | 2932928..2935564 [+], 2637 | 222157506 | ClpB protein | TssH |
12 | LF82_433 | 2935564..2938038 [+], 2475 | 222157507 | hypothetical protein | TssI |
13 | LF82_434 | 2938053..2938877 [+], 825 | 222157508 | hypothetical protein | |
14 | LF82_435 | 2938874..2940850 [+], 1977 | 222157509 | hypothetical protein | |
15 | LF82_436 | 2940860..2941132 [+], 273 | 222157510 | hypothetical protein | PAAR |
16 | LF82_437 | 2941132..2942565 [+], 1434 | 222157511 | hypothetical protein | |
17 | LF82_438 | 2942572..2945910 [+], 3339 | 222157512 | hypothetical protein | TssM |
18 | LF82_439 | 2945903..2947513 [+], 1611 | 222157513 | hypothetical protein | TssA |
19 | LF82_440 | 2947513..2948769 [+], 1257 | 222157514 | hypothetical protein | PAAR |
20 | LF82_441 | 2948772..2949215 [+], 444 | 222157515 | hypothetical protein | |
21 | LF82_442 | 2949585..2951345 [+], 1761 | 222157516 | (Q66CA4) hypothetical protein | TssF |
22 | LF82_443 | 2951309..2952388 [+], 1080 | 222157517 | hypothetical protein | TssG |
23 | LF82_444 | 2952369..2952905 [+], 537 | 222157518 | hypothetical protein | TssJ |
24 | LF82_445 | 2952909..2953337 [+], 429 | 222157519 | hypothetical protein | TssE |
25 | LF82_446 | 2953337..2954713 [+], 1377 | 222157520 | hypothetical protein | TssA |
26 | LF82_447 | 2955013..2955960 [-], 948 | 222157521 | 2-hydroxy acid dehydrogenase (EC 11195) | |
27 | LF82_448 | 2956032..2956628 [-], 597 | 222157522 | Phosphosugar isomerase | |
28 | LF82_449 | 2956631..2957806 [-], 1176 | 222157523 | Beta-cystathionase | |
29 | LF82_450 | 2957806..2959386 [-], 1581 | 222157524 | PTS system, maltose and glucose-specific II ABC component | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein