SecReT6

T6SS
Effector
Immunity
Reference

I. Summary

SecReT6 ID	797
Strain	Myxococcus stipitatus DSM 14675
Replicon	chromosome [Browse all T6SS(s) in this replicon]
Accession	NC_020126
Location	3978735..4012200
Comment
Function	N/A
T6SS Type	Type i; subtype i1
Bioinformatics investigation has been performed on this T6SS.

II. T6SS components

Component	TssH	TssD	TssL	TssI	TssA	TssB	TssC	TssE	TssF
Number	1	0	1	0	0	1	1	1	1
Component	TssG	TssJ	TssK	TssM
Number	1	0	1	1


III. genome coordinates of the T6SS gene cluster
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Note
1	MYSTI_03147	3973771..3974049 [+], 279	442320124	hypothetical protein
2	MYSTI_03148	3974110..3975333 [+], 1224	442320125	deoxyhypusine synthase
3	MYSTI_03149	3975361..3975795 [+], 435	442320126	OsmC/Ohr family protein
4	MYSTI_03150	3975890..3976417 [+], 528	442320127	hypothetical protein
5	MYSTI_03151	3976496..3978502 [-], 2007	442320128	arginine decarboxylase
6	MYSTI_03152	3978735..3979802 [+], 1068	442320129	ATP-dependent protease ATP-binding subunit ClpX	TssH
7	MYSTI_03153	3979792..3980559 [-], 768	442320130	CvpA family protein
8	MYSTI_03154	3980587..3981378 [-], 792	442320131	DnaJ domain-containing protein
9	MYSTI_03155	3983059..3984666 [-], 1608	442320132	heat shock protein 70 family protein
10	MYSTI_03156	3984866..3985702 [+], 837	442320133	class II glutamine amidotransferase domain-containing protein
11	MYSTI_03157	3985881..3986447 [+], 567	442320134	ATPase
12	MYSTI_03158	3986444..3987145 [+], 702	442320135	Ser/Thr protein kinase
13	MYSTI_03159	3987142..3987711 [+], 570	442320136	hypothetical protein
14	MYSTI_03160	3987708..3988199 [+], 492	442320137	anti-anti sigma factor protein
15	MYSTI_03161	3988260..3993092 [-], 4833	442320138	OmpA family protein
16	MYSTI_03162	3993089..3994516 [-], 1428	442320139	OmpA family protein	TagL
17	MYSTI_03163	3994768..3996696 [+], 1929	442320140	hypothetical protein
18	MYSTI_03164	3996896..3998266 [+], 1371	442320141	hypothetical protein
19	MYSTI_03165	3998455..3999000 [-], 546	442320142	hypothetical protein
20	MYSTI_03166	3998997..4002881 [-], 3885	442320143	hypothetical protein	TssM
21	MYSTI_03167	4002884..4003183 [-], 300	442320144	hypothetical protein
22	MYSTI_03168	4003194..4003832 [-], 639	442320145	hypothetical protein	TssL
23	MYSTI_03169	4003834..4005480 [-], 1647	442320146	hypothetical protein	TssF
24	MYSTI_03170	4005494..4006096 [-], 603	442320147	hypothetical protein
25	MYSTI_03171	4006124..4007773 [-], 1650	442320148	hypothetical protein
26	MYSTI_03172	4007770..4008171 [-], 402	442320149	Gpw/Gp25 family protein	TssE
27	MYSTI_03173	4008173..4009423 [-], 1251	442320150	hypothetical protein	TssK
28	MYSTI_03174	4009445..4010023 [-], 579	442320151	hypothetical protein
29	MYSTI_03175	4010067..4011557 [-], 1491	442320152	hypothetical protein	TssC
30	MYSTI_03176	4011598..4012200 [-], 603	442320153	hypothetical protein	TssB
31	MYSTI_03177	4012264..4013163 [-], 900	442320154	hypothetical protein	TssG
32	MYSTI_03178	4013168..4014220 [-], 1053	442320155	hypothetical protein
33	MYSTI_03179	4014213..4014599 [-], 387	442320156	hypothetical protein
34	MYSTI_03180	4014794..4016521 [-], 1728	442320157	AMP-dependent synthetase and ligase

Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein

Download FASTA format files

Proteins Genes

V. Investigation of the genomic context of the T6SS gene cluster.

N/A