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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | YPZ3_3263 (rbfA) | 4181413..4181823 [+], 411 | 294505372 | ribosome-binding factor A | |
2 | YPZ3_3264 (truB) | 4181823..4182797 [+], 975 | 294505373 | tRNA pseudouridine synthase B | |
3 | YPZ3_p2 | 4182919..4183188 [+], 270 | 342517038 | 30S ribosomal protein S15 | |
4 | YPZ3_3265 | 4183275..4183790 [+], 516 | 294505374 | insertion element DNA-binding protein | |
5 | YPZ3_3266 | 4183844..4184629 [+], 786 | 294505375 | IS1661 transposase | |
6 | YPZ3_3267 | 4185745..4186185 [-], 441 | 294505376 | hypothetical protein | TssE |
7 | YPZ3_3268 | 4186192..4187673 [-], 1482 | 294505377 | hypothetical protein | TssC |
8 | YPZ3_3269 | 4187741..4188238 [-], 498 | 294505378 | hypothetical protein | TssB |
9 | YPZ3_3270 | 4188762..4189280 [+], 519 | 294505379 | hypothetical protein | TssD |
10 | YPZ3_3271 | 4190181..4191092 [-], 912 | 294505380 | maltose operon periplasmic protein | |
11 | YPZ3_3272 (lamB) | 4191333..4192604 [-], 1272 | 294505381 | maltoporin | |
12 | YPZ3_3273 (malK) | 4192675..4193784 [-], 1110 | 294505382 | maltose/maltodextrin transport ATP-binding protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein