SecReT6 ID | 802  |
Strain | Vibrio anguillarum NB10 |
Replicon | chromosome [Browse all T6SS(s) in this replicon] |
Accession | GQ118992 |
Location | 1..11619 |
Comment | Type VI secretion modulates quorum sensing and stress response in Vibrio anguillarum. |
Function | effector translocation |
Experimental investigation has been performed on this T6SS. |
Component | TssH | TssD | TssL | TssI | TssA | TssB | TssC | TssE | TssF |
Number | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
Component | TssG | TssJ | TssK | TssM |
Number | 0 | 1 | 1 | 1 |
 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | clpV (clpV) | 1..591 [+], 591 | 239509131 | ClpV | TssH |
2 | vtsA (vtsA) | 734..1888 [+], 1155 | 239509132 | VtsA | |
3 | vtsB (vtsB) | 1898..4093 [+], 2196 | 239509133 | VtsB | |
4 | vtsC (vtsC) | 4090..5223 [+], 1134 | 239509134 | VtsC | |
5 | vtsD (vtsD) | 5226..5921 [+], 696 | 239509135 | VtsD | |
6 | vtsE (vtsE) | 5955..6902 [+], 948 | 239509136 | VtsE | Fha |
7 | vtsF (vtsF) | 6902..7369 [+], 468 | 239509137 | VtsF | TssJ |
8 | vtsG (vtsG) | 7369..8685 [+], 1317 | 239509138 | VtsG | TssK |
9 | vtsH (vtsH) | 8693..9835 [+], 1143 | 239509139 | VtsH | TssL |
10 | vtsI (vtsI) | 9837..11619 [+], 1783 | 239509140 | VtsI | TssM |
|

Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein
V. Investigation of the genomic context of the T6SS gene cluster.