I. Summary

SecReT6 ID	805
Strain	Klebsiella pneumoniae subsp. rhinoscleromatis strain SB3432
Replicon	chromosome [Browse all T6SS(s) in this replicon]
Accession	NC_021232
Location	2475192..2486798
Comment
Function	N/A
T6SS Type	Type i; subtype i2
Bioinformatics investigation has been performed on this T6SS.

II. T6SS components

Component	TssH	TssD	TssL	TssI	TssA	TssB	TssC	TssE	TssF
Number	1	1	1	1	0	1	1	0	0
Component	TssG	TssJ	TssK	TssM
Number	0	0	1	0

III. genome coordinates of the T6SS gene cluster
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Note
1	KPR_2374	2470252..2471142 [-], 891	529987967	hypothetical protein
2	KPR_2375	2471275..2472036 [+], 762	529987968	hypothetical protein
3	KPR_2376	2472253..2473785 [+], 1533	529987969	hypothetical protein
4	KPR_2377	2473984..2474550 [-], 567	529987970	hypothetical protein
5	KPR_2378	2475192..2475683 [+], 492	529987971	hypothetical protein	TssB
6	KPR_2379	2475720..2477270 [+], 1551	529987972	hypothetical protein	TssC
7	KPR_2380	2477280..2478623 [+], 1344	529987973	hypothetical protein	TssK
8	KPR_2381	2478620..2479309 [+], 690	529987974	hypothetical protein	TssL
9	KPR_2382	2479306..2481012 [+], 1707	529987975	hypothetical protein	TagL
10	KPR_2383	2481017..2481508 [+], 492	529987976	hypothetical protein	TssD
11	KPR_2384	2481773..2484427 [+], 2655	529987977	hypothetical protein	TssH
12	KPR_2385	2484399..2486798 [+], 2400	529987978	hypothetical protein	TssI
13	KPR_2386	2486802..2487578 [+], 777	529987979	hypothetical protein
14	KPR_2387	2487603..2487938 [+], 336	529987980	hypothetical protein
15	KPR_2388	2487923..2488132 [+], 210	529987981	hypothetical protein
16	KPR_2389	2488228..2488986 [+], 759	529987982	hypothetical protein
17	KPR_2390	2488855..2490075 [-], 1221	529987983	hypothetical protein
18	KPR_2391	2490109..2490921 [-], 813	529987984	hypothetical protein
19	KPR_2392	2490945..2491355 [-], 411	529987985	hypothetical protein

 Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein

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Proteins        Genes

V. Investigation of the genomic context of the T6SS gene cluster.

1. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the mobile genetic elements database, ACLAME.

Job_id: Replicon RefSeq: T6SS Region Start (bp): T6SS Region End (bp): Upstream Region (kb): Downstream Region (kb):

2. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the virulence factor database, VFDB.

Job_id: Replicon RefSeq: T6SS Region Start (bp): T6SS Region End (bp): Upstream Region (kb): Downstream Region (kb):

3. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against against the antibiotic resistance database, ARDB.

Job_id: Replicon RefSeq: T6SS Region Start (bp): T6SS Region End (bp): Upstream Region (kb): Downstream Region (kb):

Homology Effector list

EC042_4529

Effector identified
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Homolog
1	KPR_2383	2481017..2481508 [+], 492	529987976	hypothetical protein	EC042_4529

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Proteins        Genes

N/A

N/A