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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | SCE1572_30290 | 8607938..8609062 [-], 1125 | 521459472 | hypothetical protein | |
2 | SCE1572_30295 | 8609047..8610201 [-], 1155 | 521465251 | hypothetical protein | |
3 | SCE1572_30300 | 8610756..8611346 [-], 591 | 521465252 | hypothetical protein | |
4 | SCE1572_30305 | 8611519..8613003 [-], 1485 | 521459473 | type VI secretion protein | TssC |
5 | SCE1572_30310 | 8613007..8613498 [-], 492 | 521459474 | hypothetical protein | TssB |
6 | SCE1572_30315 | 8613517..8613651 [-], 135 | 521465253 | hypothetical protein | |
7 | SCE1572_30320 | 8613678..8615360 [-], 1683 | 521465254 | hypothetical protein | TssA |
8 | SCE1572_30325 | 8615480..8616499 [-], 1020 | 521465255 | hypothetical protein | |
9 | SCE1572_30330 | 8616790..8620506 [-], 3717 | 521465256 | hypothetical protein | TssM |
10 | SCE1572_30335 | 8620549..8621226 [-], 678 | 521465257 | hypothetical protein | TssL |
11 | SCE1572_30340 | 8621261..8622622 [-], 1362 | 521465258 | hypothetical protein | TssK |
12 | SCE1572_30345 | 8622772..8623563 [-], 792 | 521465259 | hypothetical protein | TssJ |
13 | SCE1572_30350 | 8623627..8626326 [-], 2700 | 521459475 | ATPase AAA | TssH |
14 | SCE1572_30355 | 8626364..8628229 [-], 1866 | 521465260 | hypothetical protein | |
15 | SCE1572_30360 | 8629933..8630499 [+], 567 | 521465261 | hypothetical protein | |
16 | SCE1572_30365 | 8630717..8631634 [-], 918 | 521465262 | hypothetical protein | |
17 | SCE1572_30370 | 8632161..8632640 [+], 480 | 521465263 | hypothetical protein | TssD |
18 | SCE1572_30375 | 8632920..8633270 [+], 351 | 521465264 | hypothetical protein | TssD |
19 | SCE1572_30380 | 8633318..8633740 [+], 423 | 521465265 | hypothetical protein | TssE |
20 | SCE1572_30385 | 8633814..8635583 [+], 1770 | 521465266 | hypothetical protein | TssF |
21 | SCE1572_30390 | 8635547..8636680 [+], 1134 | 521465267 | hypothetical protein | TssG |
22 | SCE1572_30395 | 8636701..8637381 [-], 681 | 521465268 | hypothetical protein | |
23 | SCE1572_30400 | 8637550..8638254 [+], 705 | 521465269 | hypothetical protein | |
24 | SCE1572_30405 | 8640295..8640564 [+], 270 | 521465270 | hypothetical protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein