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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | A464_1420 | 1410747..1411796 [-], 1050 | 526227373 | Alcohol dehydrogenase | |
2 | A464_1421 | 1412884..1413843 [-], 960 | 526227374 | hypothetical protein | |
3 | A464_1422 | 1414016..1414744 [-], 729 | 526227375 | Transcriptional regulator MerR familyassociated with photolyase | |
4 | A464_1423 | 1414802..1415176 [-], 375 | 526227376 | hypothetical protein | |
5 | A464_1424 | 1415188..1416111 [-], 924 | 526227377 | Uncharacterized protein ImpA | TssA |
6 | A464_1425 | 1416125..1419664 [-], 3540 | 526227378 | IcmF-related protein | TssM |
7 | A464_1426 | 1419661..1420407 [-], 747 | 526227379 | Inner membrane protein DotU | TssL |
8 | A464_1427 | 1420397..1421683 [-], 1287 | 526227380 | Uncharacterized protein ImpJ/VasE | TssK |
9 | A464_1428 | 1421730..1422200 [-], 471 | 526227381 | hypothetical protein | |
10 | A464_1429 | 1422531..1423082 [+], 552 | 526227382 | Uncharacterized protein ImpB | TssB |
11 | A464_1430 | 1423103..1424584 [+], 1482 | 526227383 | Uncharacterized protein ImpC | TssC |
12 | A464_1431 | 1424603..1425079 [+], 477 | 526227384 | Putative cytoplasmic protein USSDB7A | TssD |
13 | A464_1432 | 1425092..1425469 [+], 378 | 526227385 | putative cytoplasmic protein | TssE |
14 | A464_1433 | 1425488..1427209 [+], 1722 | 526227386 | Protein ImpG/VasA | TssF |
15 | A464_1434 | 1427173..1428111 [+], 939 | 526227387 | Uncharacterized protein ImpH/VasB | TssG |
16 | A464_1435 | 1428102..1430615 [+], 2514 | 526227388 | ClpB protein | TssH |
17 | A464_1436 | 1430639..1431655 [+], 1017 | 526227389 | hypothetical protein | |
18 | A464_1437 | 1431825..1433789 [+], 1965 | 526227390 | VgrG protein | TssI |
19 | A464_1438 | 1433789..1434310 [+], 522 | 526227391 | Phophatidylinositol-4-phosphate 5- kinase | |
20 | A464_1439 | 1434711..1436084 [-], 1374 | 526227392 | Multidrug and toxin extrusion (MATE) familyefflux pump YdhE/NorM | |
21 | A464_1440 | 1436301..1436942 [+], 642 | 526227393 | Riboflavin synthase eubacterial/eukaryotic | |
22 | A464_1441 | 1436986..1438134 [-], 1149 | 526227394 | Cyclopropane-fatty-acyl-phospholipid synthase | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein