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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | BDL_3739 | 262287..262976 [-], 690 | 526458657 | CDP-alcohol phosphatidyltransferase family protein | |
2 | BDL_3740 | 263342..264856 [+], 1515 | 526458604 | succinate CoA transferase family protein | |
3 | BDL_3741 | 264953..265585 [+], 633 | 526457782 | hypothetical protein | |
4 | BDL_3742 | 266566..267504 [+], 939 | 526456945 | hypothetical protein | TssA |
5 | BDL_3743 | 267538..268086 [+], 549 | 526457846 | hypothetical protein | TssB |
6 | BDL_3744 | 268083..269594 [+], 1512 | 526458114 | hypothetical protein | TssC |
7 | BDL_3745 | 269738..270265 [+], 528 | 526459131 | hypothetical protein | TssD |
8 | BDL_3746 | 270345..270776 [+], 432 | 526458798 | lysozyme family protein | TssE |
9 | BDL_3747 | 270790..272652 [+], 1863 | 526457193 | hypothetical protein | TssF |
10 | BDL_3748 | 272649..273638 [+], 990 | 526457256 | hypothetical protein | TssG |
11 | BDL_3749 (clpV) | 273641..276511 [+], 2871 | 526457442 | type VI secretion ATPase, ClpV1 family | TssH |
12 | BDL_3750 | 276502..278793 [+], 2292 | 526459208 | Rhs element Vgr family protein | TssI |
13 | BDL_3751 | 278959..281247 [+], 2289 | 526459109 | Rhs element Vgr family protein | TssI |
14 | BDL_3752 | 281251..283467 [+], 2217 | 526457961 | pentapeptide repeats family protein | |
15 | BDL_3753 | 283467..284537 [+], 1071 | 526458150 | pentapeptide repeats family protein | |
16 | BDL_3754 | 284540..285256 [+], 717 | 526456774 | hypothetical protein | |
17 | BDL_3755 | 285326..285688 [+], 363 | 526458968 | hypothetical protein | |
18 | BDL_3756 | 285706..286287 [+], 582 | 526458598 | type VI secretion lipofamily protein | TssJ |
19 | BDL_3757 | 286284..287645 [+], 1362 | 526458074 | hypothetical protein | TssK |
20 | BDL_3758 | 287671..289386 [+], 1716 | 526458107 | type IV/VI secretion system , DotU family domain protein | TssL |
21 | BDL_3759 | 289383..292886 [+], 3504 | 526459190 | intracellular multiplication and macrophage-killing family protein | TssM |
22 | BDL_3760 | 292945..293304 [+], 360 | 526458474 | hypothetical protein | |
23 | BDL_3761 | 293459..293752 [+], 294 | 526457361 | hypothetical protein | |
24 | BDL_3762 | 293977..294348 [+], 372 | 526459058 | hypothetical protein | |
25 | BDL_3763 | 294899..295798 [+], 900 | 526458163 | alpha/beta hydrolase family protein | |
26 | BDL_3764 | 296020..297339 [+], 1320 | 526459316 | hypothetical protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein