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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | BDL_4801 | 1641575..1642600 [+], 1026 | 526457533 | N-acetylmuramoyl-L-alanine amidase family protein | |
2 | BDL_4802 (tibC) | 1642728..1644128 [+], 1401 | 526458324 | glycosyltransferase tibC | |
3 | BDL_4803 | 1644256..1645746 [+], 1491 | 526459290 | coiled stalk of trimeric autotransporter adhesin family protein | |
4 | BDL_4804 | 1645826..1646203 [+], 378 | 526457091 | putative lipoprotein | |
5 | BDL_4805 | 1646460..1648313 [-], 1854 | 526457372 | hypothetical protein | TssA |
6 | BDL_4806 | 1648304..1649041 [-], 738 | 526457905 | hypothetical protein | VirG |
7 | BDL_4807 | 1649038..1650882 [-], 1845 | 526457093 | histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein | VirA |
8 | BDL_4808 | 1651142..1651636 [+], 495 | 526457335 | hypothetical protein | TssB |
9 | BDL_4809 | 1651633..1653159 [+], 1527 | 526457573 | hypothetical protein | TssC |
10 | BDL_4810 | 1653379..1653888 [+], 510 | 526456830 | type VI secretion system effector, Hcp1 family protein | TssD |
11 | BDL_4811 | 1653881..1654342 [+], 462 | 526456985 | lysozyme family protein | TssE |
12 | BDL_4812 | 1654379..1656121 [+], 1743 | 526458893 | hypothetical protein | TssF |
13 | BDL_4813 | 1656109..1657131 [+], 1023 | 526458444 | hypothetical protein | TssG |
14 | BDL_4814 (clpV) | 1657118..1660165 [+], 3048 | 526459217 | type VI secretion ATPase, ClpV1 family | TssH |
15 | BDL_4815 | 1660192..1663215 [+], 3024 | 526457471 | Rhs element Vgr family protein | TssI |
16 | BDL_4816 | 1663241..1665883 [+], 2643 | 526456780 | pentapeptide repeats family protein | |
17 | BDL_4817 | 1665901..1666965 [+], 1065 | 526457888 | pentapeptide repeats family protein | |
18 | BDL_4818 | 1666962..1667714 [+], 753 | 526457437 | hypothetical protein | |
19 | BDL_4819 | 1667743..1668135 [+], 393 | 526459099 | hypothetical protein | |
20 | BDL_4820 | 1668145..1668942 [+], 798 | 526458523 | type VI secretion lipofamily protein | TssJ |
21 | BDL_4821 | 1668975..1670372 [+], 1398 | 526458297 | hypothetical protein | TssK |
22 | BDL_4822 | 1670369..1671034 [+], 666 | 526456815 | type IV/VI secretion system , DotU family domain protein | TssL |
23 | BDL_4823 | 1671046..1675104 [+], 4059 | 526458070 | hypothetical protein | TssM |
24 | BDL_4824 | 1675824..1677035 [+], 1212 | 526457410 | ubiquitin carboxyl-terminal hydrolase family protein | BMAA0729 (e) |
25 | BDL_4825 | 1677497..1678129 [+], 633 | 526457009 | GTP cyclohydrolase I family protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein