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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | BDL_2293 | 2670305..2671366 [+], 1062 | 526471001 | macro domain protein | |
2 | BDL_2294 | 2672209..2672535 [+], 327 | 526473153 | baseplate J-like family protein | |
3 | BDL_2295 | 2672528..2672941 [+], 414 | 526472871 | phage tail protein I | |
4 | BDL_2296 | 2672959..2673441 [+], 483 | 526471622 | DNA methylase family protein | |
5 | BDL_2297 | 2673964..2674425 [+], 462 | 526471786 | putative transcription activator | |
6 | BDL_2298 | 2674529..2674894 [-], 366 | 526471780 | phage virion morphogenesis protein | |
7 | BDL_2299 | 2674996..2675781 [-], 786 | 526471466 | type IV/VI secretion system , DotU family domain protein | TssL |
8 | BDL_2300 | 2675778..2677124 [-], 1347 | 526472159 | hypothetical protein | TssK |
9 | BDL_2301 | 2677233..2677847 [-], 615 | 526473266 | type VI secretion lipofamily protein | TssJ |
10 | BDL_2302 | 2678222..2678893 [+], 672 | 526471121 | tetratricopeptide repeat family protein | |
11 | BDL_2303 | 2678930..2679448 [+], 519 | 526473160 | hypothetical protein | TssB |
12 | BDL_2304 | 2679465..2680955 [+], 1491 | 526470737 | hypothetical protein | TssC |
13 | BDL_2305 | 2681028..2681531 [+], 504 | 526470565 | type VI secretion system effector, Hcp1 family protein | TssD |
14 | BDL_2306 | 2681589..2682071 [+], 483 | 526470477 | lysozyme family protein | TssE |
15 | BDL_2307 | 2682151..2683989 [+], 1839 | 526472569 | hypothetical protein | TssF |
16 | BDL_2308 | 2683953..2685053 [+], 1101 | 526472033 | hypothetical protein | TssG |
17 | BDL_2309 (clpV) | 2685087..2687756 [+], 2670 | 526471044 | type VI secretion ATPase, ClpV1 family | TssH |
18 | BDL_2310 | 2687846..2688967 [+], 1122 | 526472464 | hypothetical protein | TssA |
19 | BDL_2311 | 2689194..2690132 [-], 939 | 526469934 | ompA family protein | TagL |
20 | BDL_2312 | 2690137..2691126 [-], 990 | 526470775 | hypothetical protein | |
21 | BDL_2313 | 2691123..2695016 [-], 3894 | 526471191 | intracellular multiplication and macrophage-killing family protein | TssM |
22 | BDL_2314 | 2695295..2695822 [-], 528 | 526470896 | D-alanyl-D-alanine carboxypeptidase family protein | |
23 | BDL_2315 | 2696272..2697240 [+], 969 | 526472679 | hypothetical protein | |
24 | BDL_2316 | 2697450..2698898 [-], 1449 | 526472145 | outer membrane efflux family protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein