 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | REMIM1_PF00458 | 486238..486558 [-], 321 | 528837972 | cytochrome-c oxidase subunit 2 protein | |
2 | REMIM1_PF00459 | 486566..487087 [-], 522 | 528837973 | hypothetical protein | |
3 | REMIM1_PF00460 | 487187..487534 [-], 348 | 528837974 | hypothetical protein | |
4 | REMIM1_PF00461 | 487735..488874 [+], 1140 | 528837975 | polysaccharide export protein | |
5 | REMIM1_PF00462 | 488871..489782 [-], 912 | 528837976 | serine/threonine protein kinase-like domain-containing protein | |
6 | REMIM1_PF00463 | 489772..491139 [-], 1368 | 528837977 | type VI secretion system-associated protein | |
7 | REMIM1_PF00464 | 491148..494624 [-], 3477 | 528837978 | type VI secretion system IcmF family protein | TssM |
8 | REMIM1_PF00465 | 494624..496162 [-], 1539 | 528837979 | type VI/VI secretion system outer membrane protein | TssL |
9 | REMIM1_PF00466 | 496159..497499 [-], 1341 | 528837980 | type VI secretion system-associated protein | TssK |
10 | REMIM1_PF00467 | 497489..498673 [-], 1185 | 528837981 | type VI protein secretion system FHA domain-containing protein | Fha |
11 | REMIM1_PF00468 | 498684..499685 [-], 1002 | 528837982 | type VI secretion system-associated protein | TssG |
12 | REMIM1_PF00469 | 499706..501487 [-], 1782 | 528837983 | type VI secretion system-associated protein | TssF |
13 | REMIM1_PF00470 | 501480..501989 [-], 510 | 528837984 | type VI secretion system lysozyme-related protein | TssE |
14 | REMIM1_PF00471 | 501982..502812 [-], 831 | 528837985 | type VI secretion system ImpE family protein | TagJ |
15 | REMIM1_PF00472 | 502809..504197 [-], 1389 | 528837986 | type VI secretion system-associated protein | TssC |
16 | REMIM1_PF00473 | 504268..505749 [-], 1482 | 528837987 | type VI secretion system-associated protein | TssC |
17 | REMIM1_PF00474 | 505879..506424 [-], 546 | 528837988 | type VI secretion system-associated protein | TssB |
18 | REMIM1_PF00475 | 506486..507550 [-], 1065 | 528837989 | type VI secretion system-associated ImpA-related domain-containing protein | TssA |
19 | REMIM1_PF00476 (clpV1) | 507886..510540 [+], 2655 | 528837990 | type VI secretion system ATPase protein ClpV1 | TssH |
20 | REMIM1_PF00477 | 510582..511058 [+], 477 | 528837991 | virulence factor secretion protein | TssD |
21 | REMIM1_PF00478 | 511204..512286 [+], 1083 | 528837992 | hypothetical protein | |
22 | REMIM1_PF00479 | 512297..513223 [+], 927 | 528837993 | hypothetical protein | |
23 | REMIM1_PF00480 | 513253..515517 [+], 2265 | 528837994 | type VI secretion system Rhs element Vgr family protein | TssI |
24 | REMIM1_PF00481 | 515531..516640 [+], 1110 | 528837995 | hypothetical protein | |
25 | REMIM1_PF00482 | 516637..518160 [+], 1524 | 528837996 | PAAR motif-containing protein | |
26 | REMIM1_PF00483 | 518181..518891 [+], 711 | 528837997 | GAD-like domain-containing protein | |
27 | REMIM1_PF00484 | 519013..519663 [+], 651 | 528837998 | hypothetical protein | |
28 | REMIM1_PF00485 | 519729..519944 [+], 216 | 528837999 | hypothetical protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein