SecReT6

T6SS
Effector
Immunity
Reference

I. Summary

SecReT6 ID	839
Strain	Paracoccus aminophilus JCM 7686
Replicon	plasmid pAMI6 [Browse all T6SS(s) in this replicon]
Accession	NC_022044
Location	161600..192618
Comment
Function	N/A
T6SS Type	Type i; subtype i3
Bioinformatics investigation has been performed on this T6SS.

II. T6SS components

Component	TssH	TssD	TssL	TssI	TssA	TssB	TssC	TssE	TssF
Number	1	1	1	0	1	1	1	1	1
Component	TssG	TssJ	TssK	TssM
Number	1	0	1	1


III. genome coordinates of the T6SS gene cluster
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Note
1	JCM7686_pAMI6p138	157485..157991 [+], 507	530320890	transcriptional regulator, MarR family
2	JCM7686_pAMI6p139	158009..160114 [-], 2106	530320891	serine/threonine protein kinase
3	JCM7686_pAMI6p140	160111..160875 [-], 765	530320892	serine/threonine phosphatase
4	JCM7686_pAMI6p141	160872..161621 [-], 750	530320893	type VI secretion system protein ImpM
5	JCM7686_pAMI6p142	161600..165238 [-], 3639	530320894	type VI secretion system protein ImpL	TssM
6	JCM7686_pAMI6p143	165235..167085 [-], 1851	530320895	type VI secretion system protein ImpK	TssL
7	JCM7686_pAMI6p144	167085..168419 [-], 1335	530320896	type VI secretion system protein ImpJ	TssK
8	JCM7686_pAMI6p145	168516..174863 [-], 6348	530320897	hypothetical protein
9	JCM7686_pAMI6p146	175056..177224 [-], 2169	530320898	peptidase M23
10	JCM7686_pAMI6p147	177231..178550 [-], 1320	530320899	hypothetical protein
11	JCM7686_pAMI6p148	178564..178980 [-], 417	530320900	hypothetical protein
12	JCM7686_pAMI6p149	179134..179598 [+], 465	530320901	hypothetical protein
13	JCM7686_pAMI6p150	179611..180255 [+], 645	530320902	putative biopolymer transport protein
14	JCM7686_pAMI6p151	180259..180735 [+], 477	530320903	hypothetical protein
15	JCM7686_pAMI6p152	180732..181133 [+], 402	530320904	hypothetical protein
16	JCM7686_pAMI6p153	181130..182242 [+], 1113	530320905	hypothetical protein
17	JCM7686_pAMI6p154	182255..184999 [-], 2745	530320906	type VI secretion system ATPase	TssH
18	JCM7686_pAMI6p155	185022..186026 [-], 1005	530320907	type VI secretion system protein ImpH	TssG
19	JCM7686_pAMI6p156	186023..187933 [-], 1911	530320908	type VI secretion system protein ImpG	TssF
20	JCM7686_pAMI6p157	187930..188454 [-], 525	530320909	type VI secretion system protein ImpF	TssE
21	JCM7686_pAMI6p158	188638..189135 [-], 498	530320910	type VI secretion system effector, Hcp1 family	TssD
22	JCM7686_pAMI6p159	189171..190661 [-], 1491	530320911	type VI secretion system protein ImpC	TssC
23	JCM7686_pAMI6p160	190661..191179 [-], 519	530320912	type VI secretion system protein ImpB	TssB
24	JCM7686_pAMI6p161	191254..192618 [-], 1365	530320913	type VI secretion system protein ImpA	TssA
25	JCM7686_pAMI6p162	192658..193977 [-], 1320	530320914	type VI secretion system protein ImpI	Fha
26	JCM7686_pAMI6p163	193982..194566 [-], 585	530320915	hypothetical protein
27	JCM7686_pAMI6p164	194903..195448 [+], 546	530320916	transcriptional regulator, TetR family
28	JCM7686_pAMI6p165	195522..196907 [+], 1386	530320917	RND family efflux transporter

Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein

Download FASTA format files

Proteins Genes

V. Investigation of the genomic context of the T6SS gene cluster.

N/A