 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | JCM7686_pAMI6p138 | 157485..157991 [+], 507 | 530320890 | transcriptional regulator, MarR family | |
2 | JCM7686_pAMI6p139 | 158009..160114 [-], 2106 | 530320891 | serine/threonine protein kinase | |
3 | JCM7686_pAMI6p140 | 160111..160875 [-], 765 | 530320892 | serine/threonine phosphatase | |
4 | JCM7686_pAMI6p141 | 160872..161621 [-], 750 | 530320893 | type VI secretion system protein ImpM | |
5 | JCM7686_pAMI6p142 | 161600..165238 [-], 3639 | 530320894 | type VI secretion system protein ImpL | TssM |
6 | JCM7686_pAMI6p143 | 165235..167085 [-], 1851 | 530320895 | type VI secretion system protein ImpK | TssL |
7 | JCM7686_pAMI6p144 | 167085..168419 [-], 1335 | 530320896 | type VI secretion system protein ImpJ | TssK |
8 | JCM7686_pAMI6p145 | 168516..174863 [-], 6348 | 530320897 | hypothetical protein | |
9 | JCM7686_pAMI6p146 | 175056..177224 [-], 2169 | 530320898 | peptidase M23 | |
10 | JCM7686_pAMI6p147 | 177231..178550 [-], 1320 | 530320899 | hypothetical protein | |
11 | JCM7686_pAMI6p148 | 178564..178980 [-], 417 | 530320900 | hypothetical protein | |
12 | JCM7686_pAMI6p149 | 179134..179598 [+], 465 | 530320901 | hypothetical protein | |
13 | JCM7686_pAMI6p150 | 179611..180255 [+], 645 | 530320902 | putative biopolymer transport protein | |
14 | JCM7686_pAMI6p151 | 180259..180735 [+], 477 | 530320903 | hypothetical protein | |
15 | JCM7686_pAMI6p152 | 180732..181133 [+], 402 | 530320904 | hypothetical protein | |
16 | JCM7686_pAMI6p153 | 181130..182242 [+], 1113 | 530320905 | hypothetical protein | |
17 | JCM7686_pAMI6p154 | 182255..184999 [-], 2745 | 530320906 | type VI secretion system ATPase | TssH |
18 | JCM7686_pAMI6p155 | 185022..186026 [-], 1005 | 530320907 | type VI secretion system protein ImpH | TssG |
19 | JCM7686_pAMI6p156 | 186023..187933 [-], 1911 | 530320908 | type VI secretion system protein ImpG | TssF |
20 | JCM7686_pAMI6p157 | 187930..188454 [-], 525 | 530320909 | type VI secretion system protein ImpF | TssE |
21 | JCM7686_pAMI6p158 | 188638..189135 [-], 498 | 530320910 | type VI secretion system effector, Hcp1 family | TssD |
22 | JCM7686_pAMI6p159 | 189171..190661 [-], 1491 | 530320911 | type VI secretion system protein ImpC | TssC |
23 | JCM7686_pAMI6p160 | 190661..191179 [-], 519 | 530320912 | type VI secretion system protein ImpB | TssB |
24 | JCM7686_pAMI6p161 | 191254..192618 [-], 1365 | 530320913 | type VI secretion system protein ImpA | TssA |
25 | JCM7686_pAMI6p162 | 192658..193977 [-], 1320 | 530320914 | type VI secretion system protein ImpI | Fha |
26 | JCM7686_pAMI6p163 | 193982..194566 [-], 585 | 530320915 | hypothetical protein | |
27 | JCM7686_pAMI6p164 | 194903..195448 [+], 546 | 530320916 | transcriptional regulator, TetR family | |
28 | JCM7686_pAMI6p165 | 195522..196907 [+], 1386 | 530320917 | RND family efflux transporter | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein