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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | M892_22355 | 1006349..1007977 [-], 1629 | 541870623 | T6SS/sigma-54-dependent transcriptional regulator VasH | |
2 | M892_22360 | 1007964..1010648 [-], 2685 | 541870624 | T6SS/ATPase, ClpA/B (ClpV1 family) VasG | TssH |
3 | M892_22365 | 1011098..1011616 [+], 519 | 541870625 | T6SS/hemolysin co-regulated protein Hcp | TssD |
4 | M892_22370 | 1011689..1013767 [+], 2079 | 541870626 | T6SS/ secreted protein VgrG | TssI |
5 | M892_22375 | 1013767..1014252 [+], 486 | 541870627 | hypothetical protein | |
6 | M892_22380 | 1014354..1015673 [+], 1320 | 541870628 | hypothetical protein | |
7 | M892_22385 | 1015654..1016646 [+], 993 | 541870629 | hypothetical protein | |
8 | M892_22390 | 1016639..1017583 [+], 945 | 541870630 | hypothetical protein | |
9 | M892_22395 | 1017819..1019822 [+], 2004 | 541871695 | T6SS/serine-threonine protein kinase TagE | |
10 | M892_22400 | 1019822..1021423 [+], 1602 | 541870631 | T6SS/ImpA domain protein VasJ | TssA |
11 | M892_22405 | 1021450..1021956 [+], 507 | 541870632 | T6SS/protein (ImpB family) VasQ | TssB |
12 | M892_22410 | 1021965..1023440 [+], 1476 | 541870633 | T6SS/protein (ImpC/EvpB family, DUF877) VasR | TssC |
13 | M892_22415 | 1023502..1023912 [+], 411 | 541871696 | T6SS/lysozyme-related protein (DUF1316) VasS | TssE |
14 | M892_22420 | 1023923..1025671 [+], 1749 | 541870634 | T6SS/protein (ImpG, DUF879) VasA | TssF |
15 | M892_22425 | 1025668..1026666 [+], 999 | 541870635 | T6SS/protein (ImpH, DUF1305) VasB | TssG |
16 | M892_22430 | 1026766..1027218 [-], 453 | 541871697 | T6SS/putative HTH-type transcriptional regulator Lrp/AsnC family | |
17 | M892_22435 | 1027251..1030640 [-], 3390 | 541870636 | T6SS/membrane protein (IcmF-like) VasK | TssM |
18 | M892_22440 | 1030668..1031972 [-], 1305 | 541870637 | T6SS/ImpA domain protein VasL | TssA |
19 | M892_22445 | 1032595..1033194 [+], 600 | 541871698 | T6SS/hypothetical protein (DUF820) | |
20 | M892_22450 | 1033204..1034718 [+], 1515 | 541870638 | T6SS/FHA-containing domain protein (ImpI family) VasC | Fha |
21 | M892_22455 | 1034762..1035211 [+], 450 | 541871699 | T6SS/lipoprotein VasD | TssJ |
22 | M892_22460 | 1035223..1036548 [+], 1326 | 541870639 | T6SS/protein (ImpJ family, DUF876) VasE | TssK |
23 | M892_22465 | 1036545..1037336 [+], 792 | 541870640 | T6SS/T4SS outer membrane protein (ImpK, DotU family) VasF | TssL |
24 | M892_22470 | 1037440..1038360 [-], 921 | 541871700 | transposase IS903 | |
25 | M892_22475 | 1038411..1038848 [-], 438 | 541871701 | DNA-binding protein | |
26 | M892_22480 | 1038941..1039426 [+], 486 | 541871702 | hypothetical protein | |
27 | M892_22485 | 1039677..1041833 [+], 2157 | 541871703 | TonB-denpendent receptor | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein