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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | VIBNI_A1426 | 1521699..1523894 [-], 2196 | 549688961 | putative Serine/threonine protein kinase | |
2 | VIBNI_A1427 | 1524204..1525592 [+], 1389 | 549688962 | putative Type VI secretion system, FHA domain-containing | Fha |
3 | VIBNI_A1428 | 1525597..1526058 [+], 462 | 549688963 | putative Type VI secretion system, lipoprotein VCA0113 | TssJ |
4 | VIBNI_A1429 | 1526088..1527413 [+], 1326 | 549688964 | hypothetical protein | TssK |
5 | VIBNI_A1430 | 1527428..1528762 [+], 1335 | 549688965 | putative Type IV / VI secretion system, DotU fused with Type VI secretion system, OmpA/MotB | TssL |
6 | VIBNI_A1431 | 1528759..1532283 [+], 3525 | 549688966 | putative Type VI secretion system, IcmF | TssM |
7 | VIBNI_A1432 | 1532265..1532960 [+], 696 | 549688967 | putative phosphatase ImpM Type VI secretion system-associated | |
8 | VIBNI_A1433 | 1532974..1533759 [+], 786 | 549688968 | putative Serine/threonine protein phosphatase | |
9 | VIBNI_A1434 | 1533759..1534886 [+], 1128 | 549688969 | putative Type VI secretion system-associated, ImpA | TssA |
10 | VIBNI_A1435 | 1534905..1535426 [+], 522 | 549688970 | hypothetical protein | TssB |
11 | VIBNI_A1436 | 1535426..1536919 [+], 1494 | 549688971 | hypothetical protein | TssC |
12 | VIBNI_A1437 | 1536958..1538463 [+], 1506 | 549688972 | hypothetical protein | TssC |
13 | VIBNI_A1438 | 1538478..1539281 [+], 804 | 549688973 | putative virulence protein, SciE type | TagJ |
14 | VIBNI_A1439 | 1539292..1539774 [+], 483 | 549688974 | putative Type VI secretion system, lysozyme-related | TssE |
15 | VIBNI_A1440 | 1539771..1541594 [+], 1824 | 549688975 | putative Type VI secretion system, VCA0110 | TssF |
16 | VIBNI_A1441 | 1541591..1542556 [+], 966 | 549688976 | hypothetical protein | TssG |
17 | VIBNI_A1442 (clpB) | 1542592..1545159 [+], 2568 | 549688977 | Chaperone protein clpB | TssH |
18 | VIBNI_A1443 | 1545381..1545860 [+], 480 | 549688978 | putative Virulence factor, secretion apparatus | TssD |
19 | VIBNI_A1444 | 1545917..1547728 [+], 1812 | 549688979 | putative VgrG protein | TssI |
20 | VIBNI_A1445 | 1547794..1548705 [+], 912 | 549688980 | hypothetical protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein