 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | BBK_4850 | 1667319..1667576 [+], 258 | 556572574 | putative tn501 transposition transposase | |
2 | BBK_4851 | 1668308..1669093 [+], 786 | 556573261 | hypothetical protein | |
3 | BBK_4852 | 1669142..1669426 [+], 285 | 556574037 | hypothetical protein | |
4 | BBK_4853 | 1669714..1669827 [-], 114 | 556572459 | hypothetical protein | |
5 | BBK_4854 | 1669824..1670423 [-], 600 | 556573494 | hypothetical protein | |
6 | BBK_4855 | 1670621..1671076 [-], 456 | 556572374 | hemolysin secretion/activation ShlB/FhaC/HecB family protein | |
7 | BBK_4856 | 1671258..1672112 [-], 855 | 556573278 | hypothetical protein | |
8 | BBK_4857 | 1672146..1672274 [-], 129 | 556573503 | hypothetical protein | |
9 | BBK_4858 | 1672290..1674494 [-], 2205 | 556572343 | Rhs element Vgr family protein | TssI |
10 | BBK_4859 (clpV) | 1674491..1677157 [-], 2667 | 556572187 | type VI secretion ATPase, ClpV1 family | TssH |
11 | BBK_4860 | 1677136..1678590 [-], 1455 | 556573343 | hypothetical protein | TssG |
12 | BBK_4861 | 1678587..1680458 [-], 1872 | 556572834 | hypothetical protein | TssF |
13 | BBK_4862 | 1680463..1681035 [-], 573 | 556574140 | lysozyme family protein | TssE |
14 | BBK_4863 (hcp1) | 1681054..1681545 [-], 492 | 556571900 | protein hcp1 | TssD |
15 | BBK_4864 | 1681605..1683113 [-], 1509 | 556573055 | hypothetical protein | TssC |
16 | BBK_4865 | 1683106..1683684 [-], 579 | 556574372 | hypothetical protein | TssB |
17 | BBK_4866 | 1683747..1684826 [-], 1080 | 556574253 | impA-related N-terminal family protein | |
18 | BBK_4867 | 1684879..1685097 [-], 219 | 556571908 | serine/threonine kinase domain protein | |
19 | BBK_4868 | 1685040..1687499 [-], 2460 | 556572029 | kinase domain protein | |
20 | BBK_4869 | 1687708..1688640 [-], 933 | 556572134 | hypothetical protein | |
21 | BBK_4870 | 1688637..1692266 [-], 3630 | 556573159 | intracellular multiplication and macrophage-killing family protein | TssM |
22 | BBK_4871 | 1692269..1693585 [-], 1317 | 556572182 | type VI secretion system OmpA/MotB family protein | TssL |
23 | BBK_4872 | 1693601..1695004 [-], 1404 | 556572666 | hypothetical protein | TssK |
24 | BBK_4873 | 1695001..1695519 [-], 519 | 556574273 | type VI secretion lipofamily protein | TssJ |
25 | BBK_4874 | 1696201..1696560 [+], 360 | 556572390 | hypothetical protein | |
26 | BBK_4875 | 1696615..1698051 [+], 1437 | 556573574 | FHA domain protein | Fha |
27 | BBK_4876 | 1698094..1699974 [-], 1881 | 556572637 | transglutaminase-like superfamily protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein