SecReT6

T6SS
Effector
Immunity
Reference

I. Summary

SecReT6 ID	884
Strain	Achromobacter xylosoxidans NBRC 15126 = ATCC 27061
Replicon	chromosome [Browse all T6SS(s) in this replicon]
Accession	NC_023061
Location	3586629..3624953
Comment
Function	N/A
T6SS Type	Type i; subtype i4b
Bioinformatics investigation has been performed on this T6SS.

II. T6SS components

Component	TssH	TssD	TssL	TssI	TssA	TssB	TssC	TssE	TssF
Number	1	1	1	3	1	1	1	1	1
Component	TssG	TssJ	TssK	TssM
Number	1	1	1	1


III. genome coordinates of the T6SS gene cluster
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Note
1	AX27061_3267	3582496..3585666 [-], 3171	568128382	hypothetical protein
2	AX27061_3268	3585650..3586636 [-], 987	568128383	hypothetical protein
3	AX27061_3269	3586629..3589322 [-], 2694	568128384	VgrG protein	TssI
4	AX27061_3270	3589339..3592023 [-], 2685	568128385	ClpB protein	TssH
5	AX27061_3271	3592043..3593134 [-], 1092	568128386	Uncharacterized protein ImpH/VasB	TssG
6	AX27061_3272	3593107..3594945 [-], 1839	568128387	Protein ImpG/VasA	TssF
7	AX27061_3273	3594999..3595484 [-], 486	568128388	Uncharacterized protein ImpF	TssE
8	AX27061_3274	3595555..3596058 [-], 504	568128389	Uncharacterized protein ImpD	TssD
9	AX27061_3275	3596099..3597589 [-], 1491	568128390	Uncharacterized protein ImpC	TssC
10	AX27061_3276	3597582..3598046 [-], 465	568128391	Uncharacterized protein ImpB	TssB
11	AX27061_3277	3598174..3598845 [-], 672	568128392	TPR repeat protein
12	AX27061_3278	3599299..3599664 [+], 366	568128393	hypothetical protein	TssJ
13	AX27061_3279	3599742..3601088 [+], 1347	568128394	Uncharacterized protein ImpJ/VasE	TssK
14	AX27061_3280	3601147..3601926 [+], 780	568128395	putative transmembrane protein	TssL
15	AX27061_3281	3602003..3607129 [+], 5127	568128396	VgrG protein	TssI
16	AX27061_3282	3607110..3607751 [+], 642	568128397	hypothetical protein
17	AX27061_3283	3607793..3610093 [-], 2301	568128398	hypothetical protein
18	AX27061_3284	3610086..3610853 [-], 768	568128399	hypothetical protein
19	AX27061_3285	3610858..3611832 [-], 975	568128400	hypothetical protein
20	AX27061_3286	3611843..3614719 [-], 2877	568128401	VgrG protein	TssI
21	AX27061_3287	3614746..3615630 [-], 885	568128402	hypothetical protein
22	AX27061_3288	3615948..3616673 [+], 726	568128403	putative transmembrane protein
23	AX27061_3289	3616744..3618144 [+], 1401	568128404	putative TRANSMEMBRANE PROTEIN
24	AX27061_3290	3618168..3621974 [+], 3807	568128405	IcmF-related protein	TssM
25	AX27061_3291	3621971..3622954 [+], 984	568128406	hypothetical protein
26	AX27061_3292	3622957..3623751 [+], 795	568128407	Outer membrane protein	TagL
27	AX27061_3293	3623841..3624953 [-], 1113	568128408	Uncharacterized protein ImpA	TssA
28	AX27061_3294	3625129..3625380 [+], 252	568128409	Orf69
29	AX27061_3295	3625417..3626577 [+], 1161	568128410	hypothetical protein	PAAR
30	AX27061_3296	3626665..3626910 [+], 246	568128411	hypothetical protein
31	AX27061_3297	3626911..3627702 [+], 792	568128412	Methionine aminopeptidase
32	AX27061_3298	3627803..3629023 [+], 1221	568128413	hypothetical protein
33	AX27061_3299	3629194..3629835 [+], 642	568128414	putative glutathione S-transferase-like protein

Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein

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Proteins Genes

V. Investigation of the genomic context of the T6SS gene cluster.

Homology Effector list

BCAL0343

Effector identified
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Homolog
1	AX27061_3274	3595555..3596058 [-], 504	568128389	Uncharacterized protein ImpD	BCAL0343

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Proteins Genes

N/A