 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | T223_00385 | 86086..89184 [-], 3099 | 568151260 | serine/threonine protein kinase | PpkA |
2 | T223_00390 | 89192..89920 [-], 729 | 568151261 | PppA | PppA |
3 | T223_00395 | 89930..90610 [-], 681 | 568151262 | type VI secretion system protein ImpM | TagF |
4 | T223_00400 | 90607..94137 [-], 3531 | 568151263 | type VI secretion protein IcmF | TssM |
5 | T223_00405 | 94134..95483 [-], 1350 | 568151264 | type VI secretion protein | TssL |
6 | T223_00410 | 95490..96824 [-], 1335 | 568151265 | type VI secretion protein | TssK |
7 | T223_00415 | 96840..97304 [-], 465 | 568151266 | type VI secretion protein | TssJ |
8 | T223_00420 | 97349..98836 [-], 1488 | 568151267 | signal peptide protein | Fha |
9 | T223_00425 | 99204..100238 [+], 1035 | 568151268 | type VI secretion protein ImpA | TssA |
10 | T223_00430 | 100327..100845 [+], 519 | 568151269 | hypothetical protein | TssB |
11 | T223_00435 | 100858..102354 [+], 1497 | 568151270 | EvpB family type VI secretion protein | TssC |
12 | T223_00440 | 102430..102918 [+], 489 | 568151271 | hypothetical protein | TssD |
13 | T223_00445 | 103146..103931 [+], 786 | 568151272 | virulence protein, SciE type | TagJ |
14 | T223_00450 | 103933..104442 [+], 510 | 568151273 | hypothetical protein | TssE |
15 | T223_00455 | 104439..106298 [+], 1860 | 568151274 | type VI secretion system protein ImpG | TssF |
16 | T223_00460 | 106262..107308 [+], 1047 | 568151275 | type VI secretion protein | TssG |
17 | T223_00465 | 107301..110009 [+], 2709 | 568151276 | ATPase AAA | TssH |
18 | T223_00470 | 110047..111987 [+], 1941 | 568151277 | type VI secretion protein ImpA | TssI |
19 | T223_00475 | 112102..112386 [-], 285 | 568151278 | hypothetical protein | Tsi6 (i) |
20 | T223_00490 | 113691..114125 [-], 435 | 568151279 | hypothetical protein | |
21 | T223_00495 | 114379..116604 [+], 2226 | 568151280 | type VI secretion protein ImpA | TssI |
22 | T223_00500 | 116632..117081 [+], 450 | 568151281 | hypothetical protein | |
23 | T223_00505 | 117098..118210 [+], 1113 | 568151282 | hypothetical protein | |
24 | T223_00510 | 118207..119244 [+], 1038 | 568151283 | 3-oxoacyl-ACP synthase | |
25 | T223_00515 | 119245..120192 [+], 948 | 568151284 | hypothetical protein | |
26 | T223_00520 | 120203..121117 [+], 915 | 568151285 | hypothetical protein | |
|
Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein