 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | T223_18685 | 3988365..3988685 [+], 321 | 568154799 | hypothetical protein | |
2 | T223_18690 | 3988742..3989299 [+], 558 | 568154800 | DNA mismatch repair protein MutS | |
3 | T223_18695 | 3989377..3989922 [+], 546 | 568154801 | GTP cyclohydrolase | |
4 | T223_18700 | 3989987..3990448 [-], 462 | 568154802 | hypothetical protein | |
5 | T223_18705 | 3990694..3991074 [+], 381 | 568154803 | hypothetical protein | |
6 | T223_18710 | 3991102..3992091 [-], 990 | 568154804 | serine/threonine protein kinase | Stk1 |
7 | T223_18715 | 3992088..3992816 [-], 729 | 568154805 | protein phosphatase | Stp1 |
8 | T223_18720 | 3992816..3996343 [-], 3528 | 568154806 | type VI secretion protein VasK | TssM |
9 | T223_18725 | 3996359..3997228 [-], 870 | 568154807 | OmpA family protein | TssL |
10 | T223_18730 | 3997231..3998562 [-], 1332 | 568154808 | type VI secretion protein | TssK |
11 | T223_18735 | 3998559..3999065 [-], 507 | 568154809 | type VI secretion protein | TssJ |
12 | T223_18740 | 3999071..4000264 [-], 1194 | 568154810 | signal peptide protein | Fha |
13 | T223_18745 | 4000282..4000422 [-], 141 | 568154811 | type VI secretion protein | |
14 | T223_18750 | 4000511..4002022 [-], 1512 | 568154812 | Fis family transcriptional regulator | Sfa2 |
15 | T223_18755 | 4002033..4004660 [-], 2628 | 568154813 | ATPase AAA | TssH |
16 | T223_18760 | 4004673..4005680 [-], 1008 | 568154814 | type VI secretion protein | TssG |
17 | T223_18765 | 4005644..4007431 [-], 1788 | 568154815 | type VI secretion protein | TssF |
18 | T223_18770 | 4007435..4007758 [-], 324 | 568154816 | type IV secretion protein Rhs | PAAR |
19 | T223_18775 | 4007769..4008176 [-], 408 | 568154817 | hypothetical protein | TssE |
20 | T223_18780 | 4008189..4009664 [-], 1476 | 568154818 | type VI secretion protein | TssC |
21 | T223_18785 | 4009693..4010199 [-], 507 | 568154819 | hypothetical protein | TssB |
22 | T223_18790 | 4010235..4011791 [-], 1557 | 568154820 | type VI secretion protein ImpA | TssA |
23 | T223_18795 | 4012963..4013565 [-], 603 | 568154821 | glutathione S-transferase | |
24 | T223_18800 | 4013621..4014787 [-], 1167 | 568154822 | GntR family transcriptional regulator | |
25 | T223_18805 | 4014869..4015345 [+], 477 | 568154823 | MarR family transcriptional regulator | |
26 | T223_18810 | 4015396..4016031 [-], 636 | 568154824 | hypothetical protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein