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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | Reut_B5248 | 1998268..1998471 [+], 204 | 73539071 | hypothetical protein | |
2 | Reut_B5249 | 1998568..1999140 [+], 573 | 73539072 | transmembrane protein | |
3 | Reut_B5250 | 1999144..2000082 [-], 939 | 73539073 | LysR family transcriptional regulator | |
4 | Reut_B5251 | 2000235..2001251 [+], 1017 | 73539074 | hypothetical protein | |
5 | Reut_B5252 | 2001297..2003006 [+], 1710 | 73539075 | hypothetical protein | |
6 | Reut_B5253 | 2003017..2003916 [-], 900 | 73539076 | hypothetical protein | |
7 | Reut_B5254 | 2004256..2005080 [-], 825 | 73539077 | NAD-dependent deacetylase | |
8 | Reut_B5255 | 2005077..2005436 [-], 360 | 73539078 | hypothetical protein | |
9 | Reut_B5256 | 2005379..2005708 [-], 330 | 73539079 | hypothetical protein | |
10 | Reut_B5257 | 2005753..2005989 [-], 237 | 73539080 | hypothetical protein | |
11 | Reut_B5258 | 2006216..2008549 [+], 2334 | 73539081 | patatin | |
12 | Reut_B5259 | 2008750..2009184 [-], 435 | 73539082 | hypothetical protein | TssE |
13 | Reut_B5260 | 2009181..2011922 [-], 2742 | 73539083 | ATPase AAA | TssH |
14 | Reut_B5261 | 2011957..2012442 [-], 486 | 73539084 | hypothetical protein | TssD |
15 | Reut_B5262 | 2012449..2014176 [-], 1728 | 73539085 | OmpA/MotB protein | TagL |
16 | Reut_B5263 | 2014181..2014828 [-], 648 | 73539086 | hypothetical protein | TssL |
17 | Reut_B5264 | 2014825..2016171 [-], 1347 | 73539087 | hypothetical protein | TssK |
18 | Reut_B5265 | 2016287..2017834 [-], 1548 | 73539088 | hypothetical protein | TssC |
19 | Reut_B5266 | 2017859..2018365 [-], 507 | 73539089 | hypothetical protein | TssB |
20 | Reut_B5267 | 2018664..2021132 [+], 2469 | 73539090 | Rhs element Vgr protein | TssI |
21 | Reut_B5268 | 2021156..2022934 [+], 1779 | 73539091 | hypothetical protein | |
22 | Reut_B5269 | 2022931..2023839 [+], 909 | 73539092 | signal peptide protein | |
23 | Reut_B5270 | 2024056..2025384 [+], 1329 | 73539093 | hypothetical protein | |
24 | Reut_B5271 | 2025768..2029238 [+], 3471 | 73539094 | hypothetical protein | TssM |
25 | Reut_B5272 | 2029244..2030818 [+], 1575 | 73539095 | hypothetical protein | TssA |
26 | Reut_B5273 | 2030836..2032662 [+], 1827 | 73539096 | hypothetical protein | TssF |
27 | Reut_B5274 | 2032659..2033708 [+], 1050 | 73539097 | hypothetical protein | TssG |
28 | Reut_B5275 | 2033721..2034359 [+], 639 | 73539098 | hypothetical protein | TssJ |
29 | Reut_B5276 | 2034417..2035232 [-], 816 | 73539099 | regulatory protein IclR | |
30 | Reut_B5277 | 2035363..2036346 [+], 984 | 73539100 | hypothetical protein | |
31 | Reut_B5278 | 2036393..2038744 [+], 2352 | 73539101 | cytochrome P450:oxidoreductase FAD/NAD(P)-binding protein | |
32 | Reut_B5279 | 2039056..2040567 [+], 1512 | 73539102 | aldehyde dehydrogenase | |
33 | Reut_B5280 | 2040820..2041776 [+], 957 | 73539103 | LysR family transcriptional regulator | |
34 | Reut_B5281 | 2041853..2042293 [-], 441 | 73539104 | hypothetical protein | |
35 | Reut_B5282 | 2042312..2043484 [-], 1173 | 73539105 | hypothetical protein | |
36 | Reut_B5283 | 2043481..2044272 [-], 792 | 73539106 | enoyl-CoA hydratase | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein