 SecReT6 ID | 905  |
| Strain | Escherichia coli strain TW-XM |
| Replicon | chromosome [Browse all T6SS(s) in this replicon] |
| Accession | KF678350 |
| Location | 1..25901 |
| Comment | T6SS2-associated mutants only presented a significant decrease in the adherence and invasion of mice brain microvascular endothelial cells (BMEC) bEnd.3 and brain tissue of duck infection model. |
| Function | anti-eukaryotic; effector translocation |
| T6SS Type | Type i; subtype i1 |
| Experimental investigation has been performed on this T6SS. |
| Component | TssH | TssD | TssL | TssI | TssA | TssB | TssC | TssE | TssF |
| Number | 1 | 2 | 1 | 1 | 2 | 1 | 2 | 1 | 1 |
| Component | TssG | TssJ | TssK | TssM |
| Number | 1 | 1 | 1 | 1 |
 |
| III. genome coordinates of the T6SS gene cluster |
| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
| 1 | xmtA (xmtA) | 1..480 [-], 480 | 611963703 | Hcp-like protein | TssD |
| 2 | xmtB (xmtB) | 498..1940 [-], 1443 | 611963704 | XmtB | TssA |
| 3 | xmtC (xmtC) | 1867..5334 [-], 3468 | 611963705 | IcmF-like protein | TssM |
| 4 | xmtD (xmtD) | 5414..6856 [-], 1443 | 611963706 | XmtD | TssA |
| 5 | xmtE (xmtE) | 6932..7570 [-], 639 | 611963707 | XmtE | |
| 6 | xmtF (xmtF) | 7618..10377 [-], 2760 | 611963708 | putative ATP-dependent Clp protease | TssH |
| 7 | xmtG (xmtG) | 10387..11151 [-], 765 | 611963709 | XmtG | TssL |
| 8 | xmtH (xmtH) | 11156..12502 [-], 1347 | 611963710 | XmtH | TssK |
| 9 | xmtI (xmtI) | 12505..13029 [-], 525 | 611963711 | XmtI | TssJ |
10 | xmtJ (xmtJ) | 13026..14306 [-], 1281 | 611963712 | XmtJ | Fha |
| 11 | xmtK (xmtK) | 14323..15372 [-], 1050 | 611963713 | XmtK | TssG |
| 12 | xmtL (xmtL) | 15336..17042 [-], 1707 | 611963714 | XmtL | TssF |
| 13 | xmtM (xmtM) | 17183..17608 [-], 426 | 611963715 | XmtM | TssE |
| 14 | xmtN (xmtN) | 17613..18140 [-], 528 | 611963716 | XmtN | TssC |
| 15 | xmtO (xmtO) | 18334..19098 [-], 765 | 611963717 | XmtO | TssC |
| 16 | xmtP (xmtP) | 19121..19624 [-], 504 | 611963718 | XmtP | TssB |
| 17 | xmtQ (xmtQ) | 20095..20253 [-], 159 | 611963719 | hypothetical protein | |
| 18 | xmtR (xmtR) | 20330..20848 [+], 519 | 611963720 | Hcp-like protein | TssD |
| 19 | xmtS (xmtS) | 21069..23051 [+], 1983 | 611963721 | XmtS | TssI |
| 20 | xmtT (xmtT) | 23158..24204 [+], 1047 | 611963722 | hypothetical protein | |
21 | xmtU (xmtU) | 24197..25636 [+], 1440 | 611963723 | hypothetical protein | PAAR |
| 22 | xmtV (xmtV) | 25611..25901 [+], 291 | 611963724 | hypothetical protein | |
| |
Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein
V. Investigation of the genomic context of the T6SS gene cluster. 