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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | FJOH_RS16860 | 3890555..3891481 [-], 927 | 500935482 | FecR domain-containing protein | |
2 | FJOH_RS16865 | 3891596..3892153 [-], 558 | 500935484 | RNA polymerase sigma-70 factor | |
3 | FJOH_RS16870 | 3892562..3894397 [-], 1836 | 500935486 | type VI secretion system baseplate subunit TssF | TssF |
4 | FJOH_RS16875 | 3894394..3894747 [-], 354 | 1520340544 | carboxypeptidase-like regulatory domain-containing protein | |
5 | FJOH_RS16880 | 3894891..3895379 [-], 489 | 500935488 | hypothetical protein | |
6 | FJOH_RS16885 | 3895387..3895947 [-], 561 | 500935490 | hypothetical protein | Fti1 (i) |
7 | FJOH_RS16890 | 3895944..3897596 [-], 1653 | 500935492 | hypothetical protein | Fte1 (e) |
8 | FJOH_RS16895 | 3897690..3898187 [-], 498 | 500935494 | hypothetical protein | |
9 | FJOH_RS16900 | 3898194..3899840 [-], 1647 | 500935496 | DUF3289 family protein | |
10 | FJOH_RS16905 | 3899844..3901652 [-], 1809 | 500935498 | type IV secretion protein Rhs | VgrG |
11 | FJOH_RS16910 | 3901691..3902086 [-], 396 | 500935500 | hypothetical protein | Hcp |
12 | FJOH_RS16915 | 3902237..3902623 [-], 387 | 500935502 | hypothetical protein | Hcp |
13 | FJOH_RS16920 | 3902805..3903236 [-], 432 | 500935504 | GPW/gp25 family protein | TssE |
14 | FJOH_RS16925 | 3903250..3903963 [-], 714 | 500935506 | hypothetical protein | |
15 | FJOH_RS16930 | 3904022..3904549 [-], 528 | 500935508 | hypothetical protein | |
16 | FJOH_RS16935 | 3904650..3906020 [-], 1371 | 500935510 | type VI secretion system contractile sheath protein TssC | TssC |
17 | FJOH_RS16940 | 3906041..3906490 [-], 450 | 500935512 | hypothetical protein | TssB |
18 | FJOH_RS16945 | 3906545..3907057 [-], 513 | 500935514 | hypothetical protein | TssO |
19 | FJOH_RS16950 | 3907083..3908252 [-], 1170 | 500935516 | hypothetical protein | TssK |
20 | FJOH_RS16955 | 3908526..3909506 [-], 981 | 500935518 | hypothetical protein | |
21 | FJOH_RS16960 | 3909608..3910762 [-], 1155 | 500935520 | SH3 domain-containing protein | |
22 | FJOH_RS16965 | 3910884..3911552 [-], 669 | 500935522 | hypothetical protein | |
23 | FJOH_RS16970 | 3911564..3912304 [-], 741 | 500935524 | hypothetical protein | |
24 | FJOH_RS16975 | 3912310..3915042 [-], 2733 | 500935526 | hypothetical protein | Fjoh_3274 (e) |
25 | FJOH_RS16980 | 3915054..3915548 [-], 495 | 500935528 | DUF4280 domain-containing protein | |
26 | FJOH_RS16985 | 3915601..3916674 [-], 1074 | 500935530 | LysM peptidoglycan-binding domain-containing protein | |
27 | FJOH_RS16990 | 3916691..3917662 [-], 972 | 500935532 | TssN family type VI secretion system protein | TssN |
28 | FJOH_RS16995 | 3917665..3918609 [-], 945 | 500935534 | type VI secretion system baseplate subunit TssG | TssG |
29 | FJOH_RS17000 | 3918593..3919234 [-], 642 | 763168155 | C40 family peptidase | |
30 | FJOH_RS17005 | 3919581..3920633 [+], 1053 | 500935538 | PKD domain-containing protein | TssP |
31 | FJOH_RS17010 | 3920641..3923100 [+], 2460 | 500935540 | ATP-dependent Clp protease ATP-binding subunit | ClpV |
32 | FJOH_RS17015 | 3923199..3923441 [-], 243 | 917987358 | hypothetical protein | |
33 | FJOH_RS17020 | 3923481..3925880 [-], 2400 | 500935545 | arylsulfatase | |
34 | FJOH_RS17025 | 3925903..3927384 [-], 1482 | 500935547 | DUF1254 domain-containing protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein