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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | Dfer_3570 | 4364071..4365003 [+], 933 | 255037322 | hypothetical protein | |
2 | Dfer_3571 | 4365094..4366212 [+], 1119 | 255037323 | peptidase S58 DmpA | |
3 | Dfer_3572 | 4366448..4367098 [+], 651 | 255037324 | LuxR family transcriptional regulator | |
4 | Dfer_3574 | 4367450..4368613 [+], 1164 | 255037325 | hypothetical protein | TssK |
5 | Dfer_3575 | 4368617..4369564 [+], 948 | 255037326 | hypothetical protein | |
6 | Dfer_3576 | 4369600..4372074 [+], 2475 | 255037327 | ATPase AAA-2 domain-containing protein | ClpV |
7 | Dfer_3577 | 4372117..4372584 [+], 468 | 255037328 | hypothetical protein | |
8 | Dfer_3578 | 4372628..4373467 [+], 840 | 255037329 | hypothetical protein | |
9 | Dfer_3579 | 4373511..4374659 [+], 1149 | 255037330 | fibronectin type III domain-containing protein | |
10 | Dfer_3580 | 4374705..4375529 [+], 825 | 255037331 | hypothetical protein | |
11 | Dfer_3581 | 4375534..4376649 [+], 1116 | 255037332 | hypothetical protein | |
12 | Dfer_3582 | 4376646..4377746 [+], 1101 | 255037333 | OmpA/MotB domain-containing protein | TagL |
13 | Dfer_3583 | 4377751..4378773 [+], 1023 | 255037334 | hypothetical protein | |
14 | Dfer_3584 | 4378889..4379143 [+], 255 | 255037335 | PAAR repeat-containing protein | PAAR |
15 | Dfer_3585 | 4379176..4379625 [+], 450 | 255037336 | hypothetical protein | TssB |
16 | Dfer_3586 | 4379843..4381210 [+], 1368 | 255037337 | hypothetical protein | TssC |
17 | Dfer_3587 | 4381322..4381729 [+], 408 | 255037338 | hypothetical protein | Hcp |
18 | Dfer_3588 | 4381733..4382233 [+], 501 | 255037339 | hypothetical protein | Hcp |
19 | Dfer_3589 | 4382234..4384072 [+], 1839 | 255037340 | Rhs element Vgr protein | VgrG |
20 | Dfer_3590 | 4384119..4384535 [+], 417 | 255037341 | hypothetical protein | Hcp |
21 | Dfer_3591 | 4384638..4385405 [-], 768 | 255037342 | hypothetical protein | TssN |
22 | Dfer_3592 | 4385483..4385911 [+], 429 | 255037343 | GPW/gp25 family protein | TssE |
23 | Dfer_3593 | 4385913..4387718 [+], 1806 | 255037344 | hypothetical protein | TssF |
24 | Dfer_3594 | 4387789..4388679 [+], 891 | 255037345 | hypothetical protein | TssG |
25 | Dfer_3595 | 4388987..4389340 [+], 354 | 255037346 | hypothetical protein | |
26 | Dfer_3596 | 4389466..4392456 [+], 2991 | 255037347 | bifunctional preprotein translocase subunit SecD/SecF | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein