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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | Cpin_2297 | 2830002..2830805 [+], 804 | 256421336 | hypothetical protein | |
2 | Cpin_2298 | 2830910..2831842 [-], 933 | 256421337 | AraC family transcriptional regulator | |
3 | Cpin_2299 | 2831949..2832803 [+], 855 | 256421338 | AraC family transcriptional regulator | |
4 | Cpin_2300 | 2833322..2835772 [+], 2451 | 256421339 | ATPase AAA | ClpV |
5 | Cpin_2301 | 2835829..2836275 [+], 447 | 256421340 | hypothetical protein | TssB |
6 | Cpin_2302 | 2836461..2837837 [+], 1377 | 256421341 | hypothetical protein | TssC |
7 | Cpin_2303 | 2837925..2838812 [+], 888 | 256421342 | hypothetical protein | |
8 | Cpin_2304 | 2838824..2839900 [+], 1077 | 256421343 | lytic transglycosylase | |
9 | Cpin_2305 | 2840091..2841923 [-], 1833 | 256421344 | hypothetical protein | TssF |
10 | Cpin_2306 | 2841933..2842364 [-], 432 | 256421345 | GPW/gp25 family protein | TssE |
11 | Cpin_2307 | 2842383..2843453 [-], 1071 | 256421346 | PKD domain-containing protein | TssP |
12 | Cpin_2308 | 2843606..2844559 [+], 954 | 256421347 | hypothetical protein | TssG |
13 | Cpin_2309 | 2844636..2845496 [+], 861 | 256421348 | hypothetical protein | TssN |
14 | Cpin_2310 | 2845542..2846717 [+], 1176 | 256421349 | hypothetical protein | TssK |
15 | Cpin_2311 | 2846740..2847252 [+], 513 | 256421350 | hypothetical protein | TssO |
16 | Cpin_2312 | 2847367..2847753 [+], 387 | 256421351 | hypothetical protein | Hcp |
17 | Cpin_2313 | 2847971..2848360 [-], 390 | 256421352 | hypothetical protein | |
18 | Cpin_2314 | 2848374..2848907 [-], 534 | 256421353 | hypothetical protein | |
19 | Cpin_2315 | 2849075..2849521 [+], 447 | 256421354 | hypothetical protein | |
20 | Cpin_2316 | 2849514..2850089 [-], 576 | 256421355 | Crp/Fnr family transcriptional regulator | |
21 | Cpin_2317 | 2850105..2851046 [-], 942 | 256421356 | pantothenate kinase | |
22 | Cpin_2318 | 2851095..2852453 [-], 1359 | 256421357 | aldehyde dehydrogenase | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein