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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | Slin_4092 | 4928189..4929376 [+], 1188 | 284038948 | hypothetical protein | |
2 | Slin_4093 | 4929428..4930318 [+], 891 | 284038949 | family 2 glycosyl transferase | |
3 | Slin_4094 | 4930395..4930862 [-], 468 | 284038950 | hypothetical protein | |
4 | Slin_4095 | 4930927..4931142 [-], 216 | 284038951 | hypothetical protein | |
5 | Slin_4096 | 4931139..4931633 [-], 495 | 284038952 | hypothetical protein | |
6 | Slin_4097 | 4931635..4932492 [-], 858 | 284038953 | OmpA/MotB domain-containing protein | TagL |
7 | Slin_4098 | 4932530..4933816 [-], 1287 | 284038954 | hypothetical protein | TssC |
8 | Slin_4099 | 4934280..4934738 [-], 459 | 284038955 | hypothetical protein | TssB |
9 | Slin_4100 | 4934905..4937391 [-], 2487 | 284038956 | ATPase AAA | ClpV |
10 | Slin_4101 | 4937415..4939910 [-], 2496 | 284038957 | hypothetical protein | |
11 | Slin_4102 | 4939907..4940794 [-], 888 | 284038958 | PKD domain-containing protein | TssP |
12 | Slin_4103 | 4940800..4941324 [-], 525 | 284038959 | hypothetical protein | TssO |
13 | Slin_4104 | 4941348..4941839 [-], 492 | 284038960 | hypothetical protein | TssO |
14 | Slin_4105 | 4941909..4942853 [+], 945 | 284038961 | hypothetical protein | TssG |
15 | Slin_4106 | 4942870..4944546 [-], 1677 | 284038962 | hypothetical protein | |
16 | Slin_4107 | 4944556..4946451 [-], 1896 | 284038963 | hypothetical protein | TssF |
17 | Slin_4108 | 4946495..4946929 [-], 435 | 284038964 | GPW/gp25 family protein | TssE |
18 | Slin_4109 | 4947115..4948845 [+], 1731 | 284038965 | Rhs element Vgr protein | VgrG |
19 | Slin_4110 | 4948881..4950137 [+], 1257 | 284038966 | hypothetical protein | |
20 | Slin_4111 | 4950224..4953193 [+], 2970 | 284038967 | Rhs family protein-like protein | |
21 | Slin_4112 | 4953087..4954241 [-], 1155 | 284038968 | hypothetical protein | TssK |
22 | Slin_4113 | 4954248..4955126 [-], 879 | 284038969 | hypothetical protein | TssN |
23 | Slin_4114 | 4955178..4955468 [-], 291 | 284038970 | hypothetical protein | PAAR |
24 | Slin_4115 | 4955659..4962495 [-], 6837 | 284038971 | hypothetical protein | |
25 | Slin_4116 | 4962895..4963353 [+], 459 | 284038972 | hypothetical protein | TssB |
26 | Slin_4117 | 4963405..4964775 [+], 1371 | 284038973 | hypothetical protein | TssC |
27 | Slin_4118 | 4964834..4965232 [+], 399 | 284038974 | hypothetical protein | Hcp |
28 | Slin_4119 | 4965261..4965677 [+], 417 | 284038975 | hypothetical protein | Hcp |
29 | Slin_4120 | 4965862..4967262 [+], 1401 | 284038976 | ATPase AAA | ClpV |
30 | Slin_4121 | 4967821..4968636 [+], 816 | 284038977 | hypothetical protein | |
31 | Slin_4122 | 4969329..4970054 [+], 726 | 284038978 | hypothetical protein | |
32 | Slin_4123 | 4970894..4972009 [+], 1116 | 284038979 | hypothetical protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein