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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | Celal_3738 | 4277566..4278900 [-], 1335 | 319955218 | hypothetical protein | |
2 | Celal_3739 | 4278907..4280688 [-], 1782 | 319955219 | rhs element vgr protein | VgrG |
3 | Celal_3740 | 4280786..4282648 [-], 1863 | 319955220 | hypothetical protein | TssF |
4 | Celal_3741 | 4282663..4283094 [-], 432 | 319955221 | gpw/gp25 family protein | TssE |
5 | Celal_3742 | 4283106..4285571 [-], 2466 | 319955222 | ATPase aaa-2 domain protein | ClpV |
6 | Celal_3743 | 4285574..4286086 [-], 513 | 319955223 | hypothetical protein | TssO |
7 | Celal_3744 | 4286098..4287240 [-], 1143 | 319955224 | hypothetical protein | TssK |
8 | Celal_3745 | 4287249..4288070 [-], 822 | 319955225 | hypothetical protein | TssN |
9 | Celal_3746 | 4288121..4289029 [-], 909 | 319955226 | hypothetical protein | TssG |
10 | Celal_3747 | 4289034..4289657 [-], 624 | 319955227 | nlp/p60 protein | |
11 | Celal_3748 | 4289722..4290747 [+], 1026 | 319955228 | pkd domain containing protein | TssP |
12 | Celal_3749 | 4290904..4291290 [+], 387 | 319955229 | hypothetical protein | Hcp |
13 | Celal_3750 | 4291419..4291868 [+], 450 | 319955230 | hypothetical protein | TssB |
14 | Celal_3751 | 4291884..4293242 [+], 1359 | 319955231 | hypothetical protein | TssC |
15 | Celal_3752 | 4293401..4293790 [+], 390 | 319955232 | hypothetical protein | Hcp |
16 | Celal_3753 | 4293841..4294719 [+], 879 | 319955233 | hypothetical protein | |
17 | Celal_3754 | 4294719..4295102 [+], 384 | 319955234 | hypothetical protein | |
18 | Celal_3755 | 4295681..4295947 [+], 267 | 319955235 | hypothetical protein | |
19 | Celal_3756 | 4296264..4297256 [+], 993 | 319955236 | hypothetical protein | |
20 | Celal_3757 | 4297253..4297789 [+], 537 | 319955237 | hypothetical protein | |
21 | Celal_3758 | 4297799..4300141 [+], 2343 | 319955238 | hypothetical protein | |
22 | Celal_3759 | 4300150..4302813 [+], 2664 | 319955239 | pkd domain containing protein | TssP |
23 | Celal_3760 | 4302889..4305825 [+], 2937 | 319955240 | pkd domain containing protein | TssP |
24 | Celal_3761 | 4305861..4310348 [+], 4488 | 319955241 | hypothetical protein | |
25 | Celal_3762 | 4310578..4313256 [+], 2679 | 319955242 | pkd domain containing protein | TssP |
26 | Celal_3763 | 4313249..4315354 [-], 2106 | 319955243 | ATP-dependent DNA helicase recg | |
27 | Celal_3764 | 4315435..4317525 [+], 2091 | 319955244 | peptidase m1 membrane alanine aminopeptidase | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein