 |
III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | Bacsa_1065 | 1215319..1215672 [-], 354 | 325298209 | hypothetical protein | |
2 | Bacsa_1066 | 1215679..1219998 [-], 4320 | 325298210 | RHS repeat-associated core domain | |
3 | Bacsa_1067 | 1220080..1221447 [-], 1368 | 325298211 | hypothetical protein | TssC |
4 | Bacsa_1068 | 1221453..1221926 [-], 474 | 325298212 | hypothetical protein | TssB |
5 | Bacsa_1069 | 1221972..1223330 [-], 1359 | 325298213 | hypothetical protein | |
6 | Bacsa_1070 | 1223342..1225153 [-], 1812 | 325298214 | Rhs element Vgr protein | VgrG |
7 | Bacsa_1071 | 1225273..1225671 [-], 399 | 325298215 | hypothetical protein | Hcp |
8 | Bacsa_1072 | 1225935..1228415 [+], 2481 | 325298216 | ATPase AAA-2 domain-containing protein | ClpV |
9 | Bacsa_1073 | 1228430..1228852 [+], 423 | 325298217 | hypothetical protein | Hcp |
10 | Bacsa_1074 | 1228866..1229282 [+], 417 | 325298218 | hypothetical protein | Hcp |
11 | Bacsa_1075 | 1229285..1230145 [+], 861 | 325298219 | hypothetical protein | |
12 | Bacsa_1076 | 1230142..1230504 [+], 363 | 325298220 | hypothetical protein | |
13 | Bacsa_1077 | 1230512..1230805 [+], 294 | 325298221 | hypothetical protein | |
14 | Bacsa_1078 | 1230820..1231224 [+], 405 | 325298222 | hypothetical protein | Hcp |
15 | Bacsa_1079 | 1231221..1231661 [+], 441 | 325298223 | hypothetical protein | Hcp |
16 | Bacsa_1080 | 1231652..1232116 [+], 465 | 325298224 | GPW/gp25 family protein | TssE |
17 | Bacsa_1081 | 1232125..1233969 [+], 1845 | 325298225 | hypothetical protein | TssF |
18 | Bacsa_1082 | 1233984..1234862 [+], 879 | 325298226 | hypothetical protein | TssN |
19 | Bacsa_1083 | 1234874..1236034 [+], 1161 | 325298227 | hypothetical protein | TssK |
20 | Bacsa_1084 | 1236054..1237016 [+], 963 | 325298228 | hypothetical protein | TssG |
21 | Bacsa_1085 | 1237038..1237535 [+], 498 | 325298229 | hypothetical protein | TssO |
22 | Bacsa_1086 | 1237547..1238056 [+], 510 | 325298230 | hypothetical protein | TssO |
23 | Bacsa_1087 | 1238062..1238967 [+], 906 | 325298231 | PKD domain-containing protein | TssP |
24 | Bacsa_1088 | 1238974..1241463 [+], 2490 | 325298232 | hypothetical protein | |
25 | Bacsa_1089 | 1241488..1242528 [+], 1041 | 325298233 | hypothetical protein | Hcp |
26 | Bacsa_1090 | 1242540..1243613 [+], 1074 | 325298234 | hypothetical protein | |
27 | Bacsa_1091 | 1243618..1244502 [+], 885 | 325298235 | hypothetical protein | |
28 | Bacsa_1092 | 1244515..1244895 [+], 381 | 325298236 | hypothetical protein | |
29 | Bacsa_1093 | 1244943..1245818 [+], 876 | 325298237 | hypothetical protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein