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III. genome coordinates of the T6SS gene cluster |
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Note |
1 | FCOL_09690 | 2273880..2276744 [-], 2865 | 365960973 | hypothetical protein | TagL |
2 | FCOL_09695 | 2276748..2277257 [-], 510 | 365960974 | hypothetical protein | |
3 | FCOL_09700 | 2277279..2278445 [-], 1167 | 365960975 | hypothetical protein | |
4 | FCOL_09705 | 2278454..2280280 [-], 1827 | 365960976 | hypothetical protein | TssF |
5 | FCOL_09710 | 2280312..2280743 [-], 432 | 365960977 | GPW/gp25 family protein | TssE |
6 | FCOL_09715 | 2280746..2281438 [-], 693 | 365960978 | hypothetical protein | |
7 | FCOL_09720 | 2281438..2281923 [-], 486 | 365960979 | hypothetical protein | |
8 | FCOL_09725 | 2281977..2282492 [-], 516 | 365960980 | hypothetical protein | TssO |
9 | FCOL_09730 | 2282496..2283653 [-], 1158 | 365960981 | hypothetical protein | TssK |
10 | FCOL_09735 | 2283842..2285206 [-], 1365 | 365960982 | hypothetical protein | TssC |
11 | FCOL_09740 | 2285218..2285667 [-], 450 | 365960983 | hypothetical protein | TssB |
12 | FCOL_09745 | 2285681..2288149 [-], 2469 | 365960984 | ATPase | ClpV |
13 | FCOL_09750 | 2288183..2289253 [-], 1071 | 365960985 | PKD domain-containing protein | TssP |
14 | FCOL_09755 | 2289234..2289980 [+], 747 | 365960986 | NLP/P60 protein | |
15 | FCOL_09760 | 2289986..2290918 [+], 933 | 365960987 | hypothetical protein | TssG |
16 | FCOL_09765 | 2291006..2291926 [+], 921 | 365960988 | hypothetical protein | TssN |
17 | FCOL_09770 | 2291931..2292977 [+], 1047 | 365960989 | hypothetical protein | |
18 | FCOL_09775 | 2292998..2293480 [+], 483 | 365960990 | hypothetical protein | |
19 | FCOL_09780 | 2293491..2295833 [+], 2343 | 365960991 | hypothetical protein | |
20 | FCOL_09785 | 2295805..2296869 [+], 1065 | 365960992 | hypothetical protein | |
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Genes in the 5-kb flanking regions if available, or non-core components encoded by the T6SS gene cluster if any. In the 'Note' column,if available, '(e)' denotes effector while '(i)' for immunity protein