SecReT6
SecReT6 ID937 experimental
StrainEscherichia coli DE719
RepliconT6SS [Browse all T6SS(s) in this replicon]
AccessionKM251715
Location1..24039
CommentDotU contributes to intracellular survival in macrophages; DotU and T6SS-2 affect bacterial colonization and survival during infection in vivo
Functionanti-eukaryotic
T6SS TypeType i; subtype i1
experimental Experimental investigation has been performed on this T6SS.

II. T6SS components
ComponentTssHTssDTssLTssITssATssBTssCTssETssF
Number321131211
ComponentTssGTssJTssKTssM
Number1112
III. genome coordinates of the T6SS gene cluster
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductNote
 

Download FASTA format files
Proteins        Genes

V. Investigation of the genomic context of the T6SS gene cluster.
1. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the mobile genetic elements database, ACLAME.
 






2. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against the virulence factor database, VFDB.
 






3. BLASTp searches of the proteins encoded by T6SS gene cluster and its flanking regions against against the antibiotic resistance database, ARDB.
 







Homology Effector list
   Hcp
Homology effector (effector protein label, when available)
Homology immunity protein (immunity protein label, when available)
(1) Wang S et al. (2014). DotU expression is highly induced during in vivo infection and responsible for virulence and Hcp1 secretion in avian pathogenic Escherichia coli. Front Microbiol. 5:588. [PudMed:25426107]