SecReT6
Effector Protein ID: 28900882
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SecReT6 ID44
T6SS typeA5
Gene symbol-
Locus tagVPA1027
StrainVibrio parahaemolyticus RIMD 2210633
Repliconchromosome II [GenBank: NC_004605] [Browse all T6SS(s) in this replicon]
Location [Strand]1081544..1082023 [-]
Producthypothetical protein
Effector typeProtein
Homologous effectorVPA1027
DescriptionHcp protein
UniProt IDQ87HD8
KEGG IDvpa:VPA1027
PDB IDNA
Domain hit(s) vs Pfam DUF796 [PF05638], Evalue: 1.60E-30, Aligned region: 6..134
Protein Sequence: 159 a.a.     [Download]
>gi|28900882|ref|NP_800537.1| hypothetical protein VPA1027 [Vibrio parahaemolyticus RIMD 2210633]
MQSNTYLKYADIKGEATAEQYKDLITLLSVDWSVGREISSYTGTAMDREASATRLYDLTITKLQDRSSPD
LFKEATIGKGKPAVFHITKQGEKVEEIMKIELTDAMISNYSVSIQDDRPVETITISYTEMMMTVTPTDDK
NNTSAPLVYGYSGVKGQQM
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Nucleotide Sequence: 480 bp     [Download]
>gi|28899855|ref|NC_004605.1|:c1082023-1081544 Vibrio parahaemolyticus RIMD 2210633 chromosome 2, complete sequence
ATGCAGTCTAATACGTATCTTAAATACGCAGATATTAAAGGTGAAGCGACAGCGGAACAATATAAGGATT
TAATTACACTACTATCTGTAGATTGGAGTGTTGGTCGTGAAATTTCTTCTTACACGGGTACAGCAATGGA
CCGTGAAGCAAGTGCAACACGCCTATATGATTTAACTATCACTAAACTTCAAGATCGTTCGTCTCCTGAT
CTATTCAAGGAAGCAACAATCGGTAAAGGTAAACCTGCAGTATTCCACATCACTAAGCAGGGCGAAAAAG
TTGAAGAAATCATGAAAATCGAACTGACTGATGCGATGATTTCTAACTACTCAGTATCGATTCAAGATGA
TCGCCCAGTAGAAACTATCACAATTTCATACACTGAAATGATGATGACAGTGACACCTACTGATGACAAA
AACAACACTTCTGCTCCGTTGGTTTACGGTTACAGCGGTGTTAAAGGTCAACAAATGTAA

Reference
(1) Salomon D et al. (2013). Vibrio parahaemolyticus Type VI Secretion System 1 Is Activated in Marine Conditions to Target Bacteria, and Is Differentially Regulated from System 2. PLoS One. 8(4):e61086. [PudMed:23613791] experimental
 
experimental experimental literature