| Effector Protein ID: 32265741 |
 SecReT6 ID | 47 |
| T6SS type | A1 |
| Gene symbol | - |
| Locus tag | HH0242 |
| Strain | Helicobacter hepaticus ATCC 51449 |
| Replicon | chromosome [GenBank: NC_004917] [Browse all T6SS(s) in this replicon] |
| Location [Strand] | 231618..234416 [-] |
| Product | hypothetical protein |
| Effector type | Protein |
| Homologous effector | HH0242 |
| Description | VgrG |
| UniProt ID | Q7VJK1 |
| KEGG ID | hhe:HH0242 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | Phage_GPD [PF05954], Evalue: 2.10E-20, Aligned region: 182..415 Phage_base_V [PF04717], Evalue: 1.40E-13, Aligned region: 543..645 DUF2345 [PF10106], Evalue: 0.003, Aligned region: 387..412 DUF2345 [PF10106], Evalue: 0.003, Aligned region: 838..917 DUF3540 [PF12059], Evalue: 0.0032, Aligned region: 613..623 DUF3540 [PF12059], Evalue: 0.0032, Aligned region: 828..902 |
| Protein Sequence: 932 a.a. [Download] |
| >gi|32265741|ref|NP_859773.1| unnamed protein product [Helicobacter hepaticus ATCC 51449] MSAFLSLDINSITFTITKAHIRESLQSPFHITCNGFIESFYADIFSATFASLGKTNSPSHTIQSHTQDTD FASSAPPYSFALDQPFNLQLLQDNFALLYISNPYGNTNYHSALSISLGNTSTPIKSYKGIITHIEYLGSK SNVSLDTNNTINTITDITNTSQQKTLSSLDIPTPKSINHRHFFTFTLTSPLIRLSLNKANRIYTDKTPLD ILKDILTAYTPQLCKQIDFSSLSQIDNPLEIITQYEESDLDFITRLAHNNGIYFYEDNDTLYVCHHTPYT PIPLTKVPFNPNVKTHNNLNEPCIFALTHSHHIHTKQFNFFSNDANNPQINTYMYSKYIDKQSPDIATHS TSNDTSLAQEDMNNPYNYTASMQSVFIPNVSFTYQANIKSLCSNQAQHTANTQALMNAQSNIYTLCLAQR LYIESKNKSLLGNNIQDNKTQEFINEYTIIALEQTLINESILADTLPSHQQANDSNISRFKDTYSNLITL LPSNLSYMPTPKPKPNPPSLMQGIVVGEEYIKAKNIKEANASIIKQSNTLYTDNFGRVKVRLHAFMAQAL LTDNDIHTTPNTNNTKHSNNTHLEDDLYTLNTHTAFLRVASPIASASSGFYHTPRVGDEVLISYLNNDID MPIIIGSLYNPSNPALPPLPLNAHQTSLSARTLNNSSALQAENTNSHHNLIESGFNEITLSNLKEQEHIY LQAQRDYEELIKHNFLQTIHNNKESQVEGTYNERIKKIHTQTIDLAKIVSIGGEYNTNVALSKDTIVGLS HTLNVGVDNKVRIAKKSSEYVGEDKEVEIGGNLNTSIKQDESRNVGGNKREVVEGDSDISIEKKFNIQTQ GEIAIHSNENIHLSSPQSLSLESDRAAVMVADNITMIADSNYLLNANNEATIQVSDTSIVAKSDSIVIKA GGVEVVIDSKGLVVKGGEVKAE |
| - |
| Nucleotide Sequence: 2799 bp [Download] |
| >gi|32265499|ref|NC_004917.1|:c234416-231618 Helicobacter hepaticus ATCC 51449 chromosome, complete genome ATGAGTGCTTTTCTTTCTTTGGATATTAACTCTATCACCTTTACCATCACCAAAGCCCATATTAGAGAAA GTTTGCAGTCTCCTTTTCATATTACTTGTAATGGTTTTATAGAATCCTTTTATGCAGATATATTTTCTGC TACTTTTGCTTCTTTGGGTAAAACAAACTCTCCCTCACACACAATCCAATCTCATACCCAAGATACCGAT TTTGCATCATCTGCTCCCCCTTATTCTTTTGCATTAGACCAACCTTTCAATCTCCAGCTATTGCAAGATA ATTTTGCTCTATTATATATTTCTAATCCCTATGGCAACACAAACTATCATAGTGCTCTTTCTATCTCTTT AGGTAATACTTCTACCCCTATTAAATCATATAAGGGTATCATTACACATATAGAGTATTTAGGTTCTAAA TCTAATGTTTCCTTAGATACAAATAACACAATCAACACTATTACTGACATAACCAATACTTCTCAACAAA AGACACTCTCTTCCTTAGATATACCTACACCTAAATCTATAAACCATAGACATTTCTTTACCTTTACACT CACTTCTCCTCTCATAAGACTTTCACTCAATAAAGCAAATAGAATCTATACAGATAAAACACCTTTAGAC ATACTCAAAGATATACTCACTGCTTATACTCCACAATTATGCAAACAAATAGATTTTTCTTCTCTTAGCC AAATTGATAATCCTTTAGAGATTATCACCCAATATGAAGAATCTGATTTAGATTTCATCACACGATTAGC TCATAATAATGGTATATACTTTTATGAAGACAATGATACCTTATATGTATGTCATCACACACCCTATACT CCTATTCCTCTCACTAAAGTCCCTTTTAATCCTAATGTAAAAACACATAATAATCTTAATGAACCCTGTA TTTTTGCTCTCACACATTCTCATCATATACACACAAAACAATTTAACTTCTTCAGCAATGATGCAAACAA TCCTCAAATCAATACTTATATGTATTCAAAATATATTGACAAACAATCCCCAGATATTGCCACTCATTCT ACATCAAATGATACTTCTCTAGCACAAGAAGATATGAATAATCCTTATAACTATACTGCCTCTATGCAAA GTGTATTTATACCCAATGTGAGTTTTACCTATCAAGCGAATATAAAGTCTCTTTGCTCTAATCAAGCCCA ACATACTGCCAATACTCAAGCTCTTATGAACGCTCAAAGCAATATCTATACACTCTGTTTAGCTCAAAGA TTATATATAGAATCTAAAAATAAATCTCTTTTAGGAAATAATATTCAAGATAATAAAACGCAAGAGTTTA TAAATGAATATACTATCATAGCATTAGAGCAAACCCTTATAAACGAATCTATTCTTGCAGATACTTTACC CTCTCATCAACAAGCCAATGATAGCAACATCTCTCGGTTCAAAGATACTTATAGTAATCTTATTACTCTC TTGCCTTCAAACCTATCTTATATGCCTACACCCAAGCCCAAACCAAACCCTCCATCTCTTATGCAAGGTA TAGTTGTAGGAGAAGAGTATATAAAAGCCAAGAATATTAAAGAGGCTAATGCAAGTATCATCAAACAGAG CAACACGCTTTATACAGATAACTTTGGCAGGGTAAAAGTAAGGCTGCATGCCTTTATGGCACAAGCTTTA CTCACGGATAATGATATACACACAACACCCAATACAAACAATACCAAACATTCAAACAATACTCATTTAG AAGATGATTTATATACTCTTAATACACACACAGCTTTTCTTAGAGTAGCCTCTCCTATTGCAAGTGCAAG TTCAGGTTTTTATCATACTCCAAGAGTGGGAGATGAAGTATTAATAAGTTACTTAAATAATGACATAGAT ATGCCCATCATTATAGGCAGTCTCTACAATCCAAGTAATCCTGCCTTACCTCCCCTCCCTTTAAATGCTC ATCAAACAAGTTTAAGTGCAAGAACTCTTAATAATAGCAGTGCATTGCAAGCAGAGAATACAAACTCTCA TCACAATCTCATAGAATCTGGATTCAATGAAATCACGCTCTCCAATCTCAAAGAACAAGAACACATCTAT CTTCAAGCACAAAGAGATTATGAAGAACTCATTAAGCATAACTTTCTCCAAACCATACATAACAATAAAG AATCTCAAGTAGAGGGAACTTATAATGAAAGGATTAAAAAGATTCATACTCAAACCATAGATTTAGCAAA GATTGTAAGTATTGGAGGAGAATATAATACCAATGTAGCTTTATCTAAAGATACCATTGTAGGATTAAGT CATACTTTAAATGTAGGAGTAGATAACAAAGTAAGGATTGCAAAGAAGAGTAGTGAATATGTAGGAGAGG ATAAGGAGGTGGAGATAGGGGGGAATCTCAATACAAGTATCAAACAAGATGAGAGTAGGAATGTAGGGGG GAATAAGAGAGAGGTGGTGGAGGGGGACAGCGATATAAGCATTGAGAAAAAGTTTAATATTCAAACACAA GGTGAAATTGCTATTCATTCTAATGAGAATATTCATTTGTCATCTCCTCAATCTTTGAGTTTAGAATCTG ATAGAGCTGCTGTAATGGTTGCAGACAATATAACAATGATTGCAGATTCTAATTATCTCCTTAATGCTAA TAATGAAGCAACAATTCAAGTGAGCGATACTTCTATTGTAGCCAAAAGTGATTCTATCGTTATTAAAGCT GGTGGAGTAGAAGTAGTCATAGATTCTAAAGGATTAGTCGTTAAAGGTGGGGAGGTAAAGGCAGAGTGA |
| Reference |
(1) Bartonickova L et al. (2013). Hcp and VgrG1 are secreted components of the Helicobacter hepaticus type VI secretion system and VgrG1 increases the bacterial colitogenic potential. Cell Microbiol. 15(6):992-1011. [PudMed:23278999] 
|
| experimental literature |