| Effector Protein ID: 402566846 |
 SecReT6 ID | 688 |
| T6SS type | A4b |
| Gene symbol | - |
| Locus tag | GEM_2080 |
| Strain | Burkholderia cepacia GG4 |
| Replicon | chromosome I [GenBank: NC_018513] [Browse all T6SS(s) in this replicon] |
| Location [Strand] | 2270338..2274066 [-] |
| Product | rhs element vgr |
| Effector type | Protein |
| Homologous effector | BTH_I2697 |
| Description | type VI secretion system Vgr family protein |
| UniProt ID | J7J2T3 |
| KEGG ID | bct:GEM_2080 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | Phage_GPD [PF05954], Evalue: 5.70E-52, Aligned region: 35..340 Phage_GPD [PF05954], Evalue: 5.70E-52, Aligned region: 698..755 DUF2345 [PF10106], Evalue: 7.40E-47, Aligned region: 667..819 T6SS_Vgr [PF13296], Evalue: 2.10E-29, Aligned region: 516..623 Phage_base_V [PF04717], Evalue: 3.00E-15, Aligned region: 384..496 Phage_base_V [PF04717], Evalue: 3.00E-15, Aligned region: 1133..1154 |
| Protein Sequence: 1242 a.a. [Download] |
| >gi|402566846|ref|YP_006616191.1| rhs element vgr [Burkholderia cepacia GG4] MDLVAALTGYGQATRHIQIDTAMPGAFVVERFHGREGVSESFRFEIDVLSSEPFLDLAPLIGSAARLRLA TAAGERCWNGYVTHAAYAESDGEFTRYRLTMESWLALLQLRRNCLYFVDLDAEGICERVFGDYPEAHRRY ELVEPLRSFRLRGQYRETDLDFVLRQLSEAGLSFRIEHGQEAGKAPSGDHTVVVFDRHARLPDGSVIAFN AQDVGDPDGVMTQFSDRRQLVPDRVVATSWKASELHALAGQAQQPADTDAPVLPVREIFDGQRAGRFDTS GDAQRYAEQRLDALQLAKRIHHGGGSSRTLEIGKVHTLNDYLGRTVRFVPLSIEHEAVNNLGAQIGQLFG RGELDKGLYRNRFVAVPEGTPIVPPFRDRPTVHGVQTAIVVGEPGGRVSSTRDHQVRIQFPWMRGVAPLP GGLTDTASRSNPAGHAPGDHRSGIVVRVAEQAAGPNFGHAFTPRVGTEVVVGFESGNIDSPVVLGQVYGG RVRPPFSAGEGSDANHSGSLTGLQTQTLDGQPGSRWVMDDAAGQLRHELNNSTAGTRLAQGYLIDQQGTM RGAYRGEGFELATQGWGVVRAGAGVLMSSTARTLGASTQLDVAERVEQLKDAANTAQELDKAATGAQAVG LTANAAQSDFLKAIDPAQDGKYAGSVSGQSATKPNGTQRDGGDPVERFATPAVLMESPENIVVTTPDSAV SYAAQHVHLTSQGDAHVGAGATVAAATGDAMSVYSVAGGLKAIAGEGPVSVEAHASTMEILADQTVRVTS TDERVDVLAQDAIVLQQGPNRITLKGGDIIVETPGQFTVKAGGHPFPGPLAASVKLPALPVLPQGDPCDF LVQALAASPAGRGAVASGGSAAGAALWGGAASGATALVAGIPVSGAGTLPLVPQAFADESSRSMPAPVPA SSGQNAAPGPSLGHSTPPPVSSELEGMPKKGPAAQSGPCNLHVPAIQQELHTVDAGCVDYFQTGADGTPV LKDKKRIWLKFSGTKDSYDIGYAPATATVTATVYIKVNLKDQYWINNGSVYMDPSTGKPFSVPFNSDGIR KDRVMRIVDRPGGLGPILGFKKRIEDGLNKGNYSMQPKACPLGRACTCKVKLKLEVELVQIGRCHAEVNL YPLVTRANSANWGEVQVEWDDQQKRYVPVSTQHALVHETGHLFGWPDEYFLDGGAVFGKYINSRNLVDVK MAQLDDNWQRTTETNLMGGGMLTEKPEIPKYYMYGFRDWFNKKTGIDWEVLK |
| - |
| Nucleotide Sequence: 3729 bp [Download] |
| >gi|402564811|ref|NC_018513.1|:c2274066-2270338 Burkholderia cepacia GG4 chromosome 1, complete sequence ATGGATCTTGTTGCAGCATTAACGGGTTACGGGCAAGCGACCCGTCATATCCAGATCGATACCGCGATGC CGGGCGCATTCGTGGTCGAGCGTTTTCACGGTCGTGAAGGGGTCAGCGAATCGTTCCGGTTCGAGATCGA TGTGCTGTCGAGCGAGCCGTTTCTCGATCTCGCGCCGCTGATCGGCAGCGCCGCGCGGCTGCGTCTCGCG ACGGCGGCGGGCGAGCGTTGCTGGAACGGTTACGTCACGCATGCCGCTTATGCGGAGAGCGACGGCGAGT TCACGCGCTACCGGCTCACGATGGAATCGTGGCTCGCGCTGCTGCAGCTGCGCCGCAATTGCCTGTATTT CGTCGACCTCGATGCCGAGGGCATCTGCGAGCGCGTGTTCGGCGACTATCCCGAAGCGCACCGGCGCTAT GAACTCGTCGAGCCGCTGCGATCGTTTCGCTTGCGCGGCCAGTATCGCGAGACCGATCTGGATTTCGTGC TGCGCCAGTTGTCGGAGGCCGGGTTGTCGTTTCGCATCGAGCACGGGCAGGAGGCGGGGAAGGCGCCGTC GGGCGACCATACCGTCGTCGTGTTCGATCGCCATGCGCGGCTGCCCGACGGCAGTGTCATCGCGTTCAAT GCGCAGGATGTCGGCGATCCGGACGGCGTGATGACGCAATTCTCCGACCGGCGTCAGCTCGTGCCGGATC GCGTGGTCGCGACCAGCTGGAAAGCCAGTGAACTCCATGCGTTGGCCGGCCAGGCGCAGCAGCCGGCCGA CACCGACGCGCCGGTGCTGCCGGTGCGGGAGATCTTCGACGGCCAGCGCGCCGGCCGCTTCGACACGAGC GGCGACGCGCAGCGTTACGCCGAGCAGAGGCTCGACGCGCTGCAGCTCGCGAAGCGGATTCACCATGGCG GCGGGTCGTCGCGCACGCTCGAGATCGGCAAGGTCCATACGCTGAACGATTATCTGGGCCGCACCGTCCG GTTCGTGCCGCTGTCGATCGAGCACGAGGCCGTGAACAACCTCGGCGCGCAGATCGGGCAACTGTTCGGG CGCGGCGAGCTCGACAAGGGCCTGTATCGCAATCGCTTCGTCGCGGTGCCGGAAGGCACGCCTATCGTGC CGCCGTTCCGCGACCGGCCGACCGTGCATGGCGTGCAGACCGCGATCGTCGTCGGCGAGCCGGGCGGGCG CGTCAGCAGCACGCGCGATCACCAGGTGCGCATCCAGTTTCCGTGGATGCGCGGCGTTGCGCCGTTGCCG GGCGGGCTGACCGATACGGCGAGCCGGTCCAATCCGGCCGGCCATGCGCCGGGCGATCATCGCTCGGGCA TCGTGGTGCGTGTCGCCGAACAGGCCGCCGGCCCGAATTTCGGTCATGCGTTCACGCCGCGCGTGGGGAC GGAAGTGGTGGTCGGCTTCGAGTCGGGCAACATCGATTCGCCGGTCGTGCTCGGCCAGGTGTACGGCGGC CGGGTGCGCCCACCGTTCTCCGCGGGCGAAGGCAGCGACGCGAACCATTCAGGATCGCTGACGGGCCTGC AGACGCAGACGCTCGACGGGCAACCGGGCAGCCGCTGGGTAATGGACGACGCCGCTGGCCAGTTGCGTCA CGAGCTGAACAATTCGACTGCCGGCACGCGCCTCGCGCAGGGCTATCTGATCGACCAGCAGGGCACGATG CGCGGCGCTTATCGCGGCGAAGGCTTCGAACTGGCGACGCAGGGATGGGGCGTCGTGCGGGCCGGGGCCG GCGTGCTGATGTCGAGTACCGCGCGAACGCTCGGTGCGTCGACGCAGCTGGATGTCGCCGAGCGCGTGGA GCAGTTGAAGGACGCGGCGAACACCGCGCAGGAACTCGACAAGGCGGCCACCGGCGCGCAGGCGGTCGGC CTGACCGCGAATGCGGCGCAGTCGGATTTCCTGAAGGCGATCGATCCCGCGCAGGACGGCAAGTATGCGG GGAGCGTGAGCGGCCAGAGCGCGACCAAGCCGAACGGGACGCAACGCGACGGCGGCGATCCCGTCGAGCG CTTCGCGACGCCTGCGGTGCTGATGGAGTCGCCGGAGAACATCGTGGTGACGACGCCGGATAGCGCGGTG TCGTATGCGGCGCAGCATGTTCATCTGACGTCGCAAGGCGATGCGCATGTGGGCGCAGGGGCGACCGTGG CGGCGGCGACTGGCGACGCGATGAGCGTCTACAGCGTGGCAGGCGGGCTCAAGGCGATCGCGGGCGAAGG GCCGGTGAGCGTTGAGGCGCATGCGTCGACGATGGAGATTCTCGCGGACCAGACCGTGCGCGTGACGTCG ACCGACGAACGCGTCGATGTGCTCGCGCAGGATGCGATCGTGCTGCAGCAGGGGCCGAACCGGATCACGC TGAAGGGCGGCGACATCATCGTCGAGACGCCGGGGCAGTTCACGGTGAAGGCAGGCGGGCATCCGTTCCC GGGGCCGCTGGCGGCGAGCGTGAAGCTGCCGGCGCTGCCAGTGTTGCCGCAGGGGGATCCGTGTGATTTT CTCGTGCAGGCGCTGGCGGCGAGTCCGGCGGGGCGTGGGGCGGTGGCGTCGGGGGGGAGTGCGGCGGGTG CGGCGCTATGGGGCGGGGCAGCGTCGGGCGCGACGGCGTTGGTGGCGGGCATACCGGTCTCGGGAGCAGG AACCTTGCCGCTTGTCCCGCAGGCATTTGCAGATGAGTCGAGTCGATCCATGCCTGCACCGGTACCCGCA TCATCGGGACAGAATGCGGCGCCCGGCCCGTCGCTCGGTCATTCGACTCCGCCGCCGGTTTCCAGCGAAC TGGAAGGCATGCCGAAGAAAGGCCCGGCTGCGCAAAGCGGGCCGTGCAATCTTCACGTCCCTGCCATCCA GCAAGAGCTCCATACGGTCGATGCAGGATGCGTCGACTATTTCCAGACGGGAGCGGACGGCACGCCGGTG CTCAAGGACAAGAAACGAATCTGGCTGAAATTTTCCGGCACGAAGGATTCGTACGATATCGGATACGCAC CCGCGACGGCGACCGTGACGGCGACCGTCTATATCAAGGTCAACTTGAAGGACCAGTACTGGATCAACAA CGGGAGCGTCTACATGGATCCATCGACCGGCAAGCCGTTCTCGGTGCCGTTCAATAGCGATGGAATCCGT AAAGACAGAGTGATGAGGATCGTGGACCGGCCGGGTGGGCTGGGTCCCATATTGGGCTTCAAGAAACGCA TCGAGGACGGGTTGAATAAAGGGAACTATTCGATGCAGCCAAAGGCATGCCCGCTTGGTCGTGCATGCAC GTGCAAGGTCAAGCTGAAACTGGAAGTCGAACTGGTTCAAATCGGACGATGCCATGCGGAGGTCAATCTC TATCCGTTGGTAACGCGGGCGAACTCGGCGAATTGGGGGGAAGTGCAAGTCGAGTGGGACGACCAACAGA AGCGGTATGTCCCGGTGTCGACCCAGCATGCACTCGTGCATGAGACCGGGCATCTGTTCGGCTGGCCAGA TGAGTACTTTCTTGACGGCGGCGCCGTGTTCGGAAAGTACATCAATTCACGAAATCTGGTCGACGTGAAA ATGGCGCAACTTGACGACAACTGGCAGCGCACGACCGAGACGAACTTGATGGGCGGCGGAATGCTCACGG AAAAACCGGAAATTCCGAAGTACTACATGTATGGTTTCCGTGATTGGTTCAACAAAAAAACCGGAATTGA CTGGGAAGTGCTGAAATGA |