Home 
 
Organism: Lactobacillus gasseri JV-V03
Accession No. of Nucleotide Sequence: NZ_ACGO02000004
Location of the putative gene cluster: 11273..16465
    
Thiopeptide Series, Family: -
Thiopeptide: - (Putative precursor peptide identified)
Thiopeptide genotype: Type III

Table 1. The context of the putative gene cluster involved in the thiopeptide biosynthesis
Gene Position Strand Lenth(bp) Product Note Linkout
HMPREF0514_117214243..5331
1
1089replication initiator protein A[NCBI] [UniProt]
HMPREF0514_117225493..5744
1
252conserved hypothetical protein[NCBI] [UniProt]
HMPREF0514_117235741..6562
1
822conserved hypothetical protein[NCBI] [UniProt]
HMPREF0514_117246552..6830
-1
279conserved hypothetical protein[NCBI] [UniProt]
HMPREF0514_117256853..7080
-1
228conserved hypothetical protein[NCBI] [UniProt]
HMPREF0514_117267333..9393
1
2061probable nickase[NCBI] [UniProt]
HMPREF0514_117279724..10086
1
363conserved hypothetical protein[NCBI] [UniProt]
HMPREF0514_11728(frr2)10223..10399
1
177ribosome recycling factorprecursor peptide[NCBI] [UniProt]
HMPREF0514_1172910567..11256
1
690bacterioferritin comigratory protein[NCBI] [UniProt]
HMPREF0514_1173011273..13030
1
1758conserved hypothetical proteinnosG[NCBI] [UniProt]
HMPREF0514_1173113099..15633
1
2535lantibiotic dehydratase, superfamily proteinnosE[NCBI] [UniProt]
HMPREF0514_1173215623..16465
1
843lantibiotic biosynthesis proteinnosD[NCBI] [UniProt]
HMPREF0514_1173316452..17237
1
786hypothetical proteinnosO[NCBI] [UniProt]
HMPREF0514_1173417242..18609
1
1368conserved hypothetical proteinnosF[NCBI] [UniProt]
HMPREF0514_1173518611..18820
1
210conserved hypothetical protein[NCBI] [UniProt]
HMPREF0514_1173618807..20279
1
1473possible acetyl-CoA synthetase[NCBI] [UniProt]
HMPREF0514_1173720281..21168
1
888alpha/beta fold family hydrolase[NCBI] [UniProt]
HMPREF0514_1173821137..21598
1
462MerR-family transcriptional regulator[NCBI] [UniProt]
HMPREF0514_1173921606..22493
1
888AAA ATPase[NCBI] [UniProt]
HMPREF0514_1174022912..23523
1
612integrase[NCBI] [UniProt]
HMPREF0514_1174123631..24221
1
591possible transcriptional regulator[NCBI] [UniProt]

View genome context of this sequence in the genome browser
(use right click or ctrl-click to open in a new window)

Note: This gene cluster is predicted by in silico method.

* : Newly annotated orf that was missed in the original genome annotation at GenBank
"; } ?>