Biological Database at MML, SJTU

The Microbial Bioinformatics Group at MML, SJTU is focused on in-depth mining of bacterial genomes by combination of bioinformatics approaches and molecular biology experimental techniques. The current work emphasizes:
(i) applied bioinformatics for comparative analysis of bacterial mobile genome;
(ii) characterization of novel mobile genetic elements in Klebsiella pneumoniae and other opportunistic bacterial pathogens that have developed antibiotic resistance, and the antibiotics-producing Streptomyces.
SecReT6, a web-based bacterial type VI secretion system (T6SS) resource.
SecReT4, a web-based bacterial type IV secretion system (T4SS) resource.
ICEberg, a web-based resource for integrative and conjugative elements found in Bacteria.
ThioBase, a web-based database of thiopeptides featured in genetics and chemistry.
TADB, a web-based resource for Type 2 toxin-antitoxin loci in Bacteria and Archaea.
dndDB, a database focused on phosphorothioation of the DNA backbone.